Gene omics information

Query gene ID PtpAffx.225397.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9PtpAffx.225397.1.S1_x_atpmrna44718hypothetical protein-1e-7At1g61550S-locus protein kinase, putativeS.X.H.G.
0.4471.9Ptp.2868.1.S1_atBU834773hypothetical protein-2e-5At1g36050unknown proteinS.X.H.G.
0.3863.7PtpAffx.54382.1.A1_atCV242304--3e-9At5g45420myb family transcription factorS.X.H.G.
0.3661.6PtpAffx.53642.1.S1_atCV242715hypothetical protein-1e+0At5g28630glycine-rich proteinS.X.H.G.
0.3559.7PtpAffx.13863.1.A1_atCK087652--1e+0At3g24280SMAP2 (small acidic protein 2)S.X.H.G.
0.3357.5Ptp.5452.1.S1_a_atCV268062hypothetical protein-8e-12At5g49540unknown proteinS.X.H.G.
0.3255.2PtpAffx.143791.2.S1_s_atCK109476hypothetical protein-1e+0At3g16880F-box protein-relatedS.X.H.G.
0.3255.2PtpAffx.215497.1.S1_s_atpmrna29725hypothetical protein-8e-1At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)S.X.H.G.
0.3153.7Ptp.7396.1.S1_atCK092348hypothetical protein-6e-13At2g30880pleckstrin homology (PH) domain-containing proteinS.X.H.G.
0.3153.7PtpAffx.6033.2.S1_atBU889316histone deacetylase-9e-55At4g38130HD1 (HISTONE DEACETYLASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.597.8GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.596.1GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9401338PtpAffx.225399.1.S1_x_atpmrna44720hypothetical protein-3e-5At1g61430S-locus protein kinase, putativeC.G.S.X.
0.8701273PtpAffx.225395.1.S1_s_atpmrna44716hypothetical protein-3e-5At1g61430S-locus protein kinase, putativeC.G.S.X.
0.750854PtpAffx.225847.1.S1_x_atpmrna45470hypothetical protein-1e-6At3g16030CES101 (CALLUS EXPRESSION OF RBCS 101)C.G.S.X.
0.830797PtpAffx.225392.1.S1_atpmrna44713hypothetical protein-1e-7At1g11300ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingC.G.S.X.
0.773e-169595PtpAffx.224206.1.S1_atpmrna42534hypothetical protein-3e-5At4g21390B120C.G.S.X.
0.801e-125450PtpAffx.225398.1.S1_x_atpmrna44719hypothetical protein-2e-6At3g16030CES101 (CALLUS EXPRESSION OF RBCS 101)C.G.S.X.
0.801e-125450PtpAffx.225398.1.S1_atpmrna44719hypothetical protein-2e-6At3g16030CES101 (CALLUS EXPRESSION OF RBCS 101)C.G.S.X.
0.345e-66252PtpAffx.125087.1.S1_atCK104099--2e-2At4g23240protein kinase family proteinC.G.S.X.
0.231e-42174PtpAffx.117850.1.S1_atBU872502--2e-2At5g38344transmembrane receptorC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-757Arabidopsis thalianaAt1g61550842449S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA---C.G.S.X.
0.164e-859Glycine maxGmaAffx.72107.1.S1_atBE805798--4e-3At4g38830protein kinase family proteinC.G.S.X.
0.116e-548Hordeum vulgareContig18728_atContig18728--6e-6At1g61610S-locus lectin protein kinase family proteinC.G.S.X.
0.119e-756Oryza sativaOs01g0366300AK064115.1-ARK3 product/receptor-like serine/threonineprotein kinase ARK32e-8At3g16030CES101 (CALLUS EXPRESSION OF RBCS 101)C.G.S.X.
0.041e-138Triticum aestivumTa.26313.1.A1_atCD490651--9e-2At4g21390B120C.G.S.X.
0.035e-134Vitis vinifera1617431_atCB344842hypothetical protein LOC100250428 /// hypothetical LOC100260683-8e+0At4g29480mitochondrial ATP synthase g subunit family proteinC.G.S.X.
0.062e-136Zea maysZm.16280.1.A1_atCO527119receptor-like kinase-4e-13At4g21390B120C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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