Gene omics information

Query gene ID PtpAffx.225309.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9299.3PtpAffx.225309.1.S1_atpmrna44567hypothetical protein-2e-1At5g39580peroxidase, putativeS.X.H.G.
0.3052.0Ptp.5460.1.S1_atCV248055hypothetical protein-3e-32At4g16450unknown proteinS.X.H.G.
0.1626.9Ptp.4385.1.S1_atCV247957hypothetical protein-5e-34At5g18800NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family proteinS.X.H.G.
0.1525.3PtpAffx.30129.1.S1_atCK090649--7e+0At5g50423-S.X.H.G.
0.1423.5PtpAffx.52705.1.A1_s_atCV256897hypothetical protein-6e-12At4g16450unknown proteinS.X.H.G.
0.1321.6Ptp.3364.1.S1_atBU814868hypothetical protein-2e-17At2g41160ubiquitin-associated (UBA)/TS-N domain-containing proteinS.X.H.G.
0.1219.6PtpAffx.146151.1.S1_s_atCX173632hypothetical protein-5e+0At3g56110PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1)S.X.H.G.
0.1219.6Ptp.3549.1.S1_atDN493225hypothetical protein-2e-3At2g18630unknown proteinS.X.H.G.
0.0812.9PtpAffx.8185.1.S1_atCK087352hypothetical protein-5e-4At4g17010unknown proteinS.X.H.G.
0.0711.6Ptp.158.1.S1_atCK0874045-formyltetrahydrofolate cyclo-ligase-6e+0At5g35300unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.899.1GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
6.898.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.193.2GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000934PtpAffx.225309.1.S1_s_atpmrna44567hypothetical protein-2e-1At5g39580peroxidase, putativeC.G.S.X.
0.620791PtpAffx.224549.1.S1_s_atpmrna43182hypothetical protein-8e-3At1g05250peroxidase, putativeC.G.S.X.
0.069e-857Ptp.7220.1.S1_s_atDN502495hypothetical protein-2e-3At1g05260RCI3 (RARE COLD INDUCIBLE GENE 3)C.G.S.X.
0.052e-550PtpAffx.11843.1.S1_a_atCV240369hypothetical protein-4e-8At1g05260RCI3 (RARE COLD INDUCIBLE GENE 3)C.G.S.X.
0.025e-342PtpAffx.86604.1.S1_atBP935860hypothetical protein-4e-2At2g41480electron carrier/ heme binding / peroxidaseC.G.S.X.
0.072e-240PtpAffx.211367.1.S1_atpmrna22281hypothetical protein-3e-2At2g24800peroxidase, putativeC.G.S.X.
0.052e-240PtpAffx.209208.1.S1_atpmrna18211hypothetical protein-4e-1At3g21770peroxidase 30 (PER30) (P30) (PRXR9)C.G.S.X.
0.042e-240PtpAffx.207225.1.S1_atpmrna14330hypothetical protein-1e-4At5g58400peroxidase, putativeC.G.S.X.
0.033e-136PtpAffx.85862.1.S1_atCK106263hypothetical protein-9e-2At1g77100peroxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-136Arabidopsis thalianaAt5g39580833954peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus, N-terminal protein myristoylation;C:endomembrane system;PFO---C.G.S.X.
0.068e-238Glycine maxGmaAffx.92917.1.S1_s_atCF808642peroxidase-6e-3At3g21770peroxidase 30 (PER30) (P30) (PRXR9)C.G.S.X.
0.042e+032Hordeum vulgareContig7666_s_atContig7666--3e-3At5g67400peroxidase 73 (PER73) (P73) (PRXR11)C.G.S.X.
0.052e-344Oryza sativaOs01g02935009629.m01843--4e-1At5g66390peroxidase 72 (PER72) (P72) (PRXR8)C.G.S.X.
0.079e-134Triticum aestivumTaAffx.24551.1.S1_atCA717515--4e-3At5g39580peroxidase, putativeC.G.S.X.
0.083e-754Vitis vinifera1610628_atCF213924hypothetical protein LOC100267732-2e-5At5g42180peroxidase 64 (PER64) (P64) (PRXR4)C.G.S.X.
0.032e+032Zea maysZm.9774.1.A1_atBQ779271hypothetical protein LOC100276168-5e+0At2g41997LCR51 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 51)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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