Gene omics information

Query gene ID PtpAffx.225107.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7292.7PtpAffx.225107.1.S1_atpmrna44210hypothetical protein-3e-4At1g28170sulfotransferase family proteinS.X.H.G.
0.7192.6PtpAffx.217950.1.S1_s_atpmrna33421hypothetical protein-2e+0At3g45870integral membrane family protein / nodulin MtN21-relatedS.X.H.G.
0.6287.2PtpAffx.219306.1.S1_s_atpmrna35187hypothetical protein-2e-1At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)S.X.H.G.
0.6287.2PtpAffx.200015.1.S1_atpmrna24cytochrome P450-8e-1At5g36130cytochrome P450 familyS.X.H.G.
0.6187.0PtpAffx.219304.1.S1_s_atpmrna35185hypothetical protein-2e-1At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)S.X.H.G.
0.6086.0PtpAffx.249.67.A1_atCV240981--4e-12At1g47710serpin, putative / serine protease inhibitor, putativeS.X.H.G.
0.5582.2PtpAffx.206099.1.S1_atpmrna12085hypothetical protein-8e-3At3g57240BG3 (BETA-1,3-GLUCANASE 3)S.X.H.G.
0.5582.2Ptp.6057.1.S1_s_atCK090638anthocyanidin synthase-5e-2At4g22880LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)S.X.H.G.
0.4875.4PtpAffx.145936.1.S1_atCX181983--5e+0At5g48190unknown proteinS.X.H.G.
0.4774.6PtpAffx.203765.1.S1_atpmrna7437hypothetical protein-8e-1At4g28680tyrosine decarboxylase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.199.4GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
9.898.9GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
8.598.6GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
7.798.3GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
7.698.3GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.896.4GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.796.3GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.095.3GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.995.1GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001225PtpAffx.225107.1.S1_x_atpmrna44210hypothetical protein-3e-4At1g28170sulfotransferase family proteinC.G.S.X.
0.600674PtpAffx.225342.1.S1_x_atpmrna44626hypothetical protein-1e-4At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.600674PtpAffx.225342.1.S1_s_atpmrna44626hypothetical protein-1e-4At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.586e-179626PtpAffx.224334.1.S1_atpmrna42788--1e-4At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.684e-152537PtpAffx.224130.1.S1_s_atpmrna42377hypothetical protein-1e-1At1g28170sulfotransferase family proteinC.G.S.X.
0.684e-152537PtpAffx.224130.1.S1_atpmrna42377hypothetical protein-1e-1At1g28170sulfotransferase family proteinC.G.S.X.
0.285e-1995PtpAffx.225117.1.S1_x_atpmrna44226hypothetical protein-1e-1At5g07000ST2B (SULFOTRANSFERASE 2B)C.G.S.X.
0.155e-1995PtpAffx.224333.1.S1_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.155e-1995PtpAffx.224333.1.S1_x_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-446Arabidopsis thalianaAt1g28170839711sulfotransferase family proteinF:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF---C.G.S.X.
0.047e+032Glycine maxPsAffx.C5000199_atPsAffx.C5000199--1e+0At3g02420unknown proteinC.G.S.X.
0.046e-134Hordeum vulgareHVSMEi0001B07r2_atHVSMEi0001B07r2--6e-1At5g34828-C.G.S.X.
0.039e+032Oryza sativaOsAffx.31154.1.S1_at---0C.G.S.X.
0.043e-136Triticum aestivumTaAffx.4661.1.S1_atCA735340--7e-1At2g45403unknown proteinC.G.S.X.
0.042e-238Vitis vinifera1611953_atCB968896--1e+0At1g11860aminomethyltransferase, putativeC.G.S.X.
0.038e+030Zea maysZmAffx.90.1.A1_atAI665360--3e+0At2g01755unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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