Gene omics information

Query gene ID PtpAffx.225085.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5683.9PtpAffx.225085.1.S1_s_atpmrna44181hypothetical protein-4e+0At5g65274-S.X.H.G.
0.4471.9PtpAffx.221378.1.S1_atpmrna38249hypothetical protein-9e-1At5g18040unknown proteinS.X.H.G.
0.4471.9PtpAffx.219661.1.S1_atpmrna35628hypothetical protein-1e+1At4g36370unknown proteinS.X.H.G.
0.4369.7PtpAffx.58826.1.A1_atCK089170--5e-1At2g34620mitochondrial transcription termination factor-related / mTERF-relatedS.X.H.G.
0.2950.5PtpAffx.219256.1.S1_atpmrna35121hypothetical protein-3e+0At1g53400unknown proteinS.X.H.G.
0.2747.1PtpAffx.147231.1.A1_atCV244696--1e+0At3g50860clathrin adaptor complex small chain family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.299.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
10.699.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.298.5GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
7.298.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
6.397.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.389.8GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
2.289.3GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.088.0GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
2.088.0GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.886.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.420803PtpAffx.225131.1.S1_atpmrna44252hypothetical protein-2e-1At2g15080AtRLP19 (Receptor Like Protein 19)C.G.S.X.
0.940678PtpAffx.225367.1.S1_atpmrna44672hypothetical protein-4e+0At5g40560DegP13 (DegP protease 13)C.G.S.X.
0.271e-87323PtpAffx.225083.1.S1_atpmrna44179hypothetical protein-5e-6At2g15080AtRLP19 (Receptor Like Protein 19)C.G.S.X.
0.616e-83307PtpAffx.225084.1.S1_s_atpmrna44180hypothetical protein-4e-1At5g23400disease resistance family protein / LRR family proteinC.G.S.X.
0.171e-56220PtpAffx.214520.1.S1_atpmrna28231hypothetical protein-1e+0At3g03770leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.062e-1273PtpAffx.43586.1.A1_atCV265842--6e+0At4g14690ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)C.G.S.X.
0.094e-1065PtpAffx.225100.1.S1_x_atpmrna44198hypothetical protein-3e-1At5g13290CRN (CORYNE)C.G.S.X.
0.122e-963PtpAffx.225884.1.S1_x_atpmrna45529hypothetical protein-2e-1Atmg00760-C.G.S.X.
0.122e-963PtpAffx.225884.1.S1_s_atpmrna45529hypothetical protein-2e-1Atmg00760-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt5g652746240785-F:molecular_function unknown;P:regulation of actin filament polymerization;C:cytoskeleton;MFPO---C.G.S.X.
0.043e-136Glycine maxGmaAffx.51214.1.S1_atBM891662--8e-1At5g55125unknown proteinC.G.S.X.
0.055e-134Hordeum vulgareHC112D12_T3_atHC112D12_T3--7e+0At4g34881unknown proteinC.G.S.X.
0.022e+034Oryza sativaOs04g0665700AK121951.1-KH, type 1 domain containing protein7e-1At3g5634040S ribosomal protein S26 (RPS26C)C.G.S.X.
0.041e+034Triticum aestivumTaAffx.27310.1.S1_atCA678487--2e-1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)C.G.S.X.
0.043e-134Vitis vinifera1617417_s_atCD798528hypothetical protein LOC100248713-2e-11At4g38520protein phosphatase 2C family protein / PP2C family proteinC.G.S.X.
0.032e+032Zea maysZm.19291.1.A1_atCO521799hypothetical protein LOC100279783-6e+0Atmg00580-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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