Gene omics information

Query gene ID PtpAffx.224972.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.224972.1.S1_atpmrna43930hypothetical protein-2e-6At4g03230ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingS.X.H.G.
0.7393.6PtpAffx.217946.1.S1_x_atpmrna33417hypothetical protein-6e-2At4g18070unknown proteinS.X.H.G.
0.6791.1Ptp.6145.1.S1_atDN500632--1e+0At5g08710regulator of chromosome condensation (RCC1) family protein / UVB-resistance protein-relatedS.X.H.G.
0.6791.1PtpAffx.210610.1.S1_x_atpmrna20813hypothetical protein-5e-21At2g31880leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.3559.7PtpAffx.46526.1.S1_atCV243285NAC domain protein, IPR003441-2e-6At2g17040anac036 (Arabidopsis NAC domain containing protein 36)S.X.H.G.
0.1932.7PtpAffx.222596.1.S1_s_atpmrna40127hypothetical protein-1e+0At5g19710-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.399.9GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
12.699.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
11.199.1GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
8.398.5GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
7.698.3GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.597.1GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.684.5GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.133e-55218PtpAffx.101707.1.A1_atCV254590--2e+0At5g43840AT-HSFA6AC.G.S.X.
0.061e-1483PtpAffx.224732.1.S1_atpmrna43548hypothetical protein-2e-5At4g03230ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingC.G.S.X.
0.211e-1173PtpAffx.224973.1.S1_s_atpmrna43931hypothetical protein-2e-15At4g03230ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingC.G.S.X.
0.032e-965PtpAffx.224695.1.S1_atpmrna43500hypothetical protein-1e-5At4g04500protein kinase family proteinC.G.S.X.
0.032e-965PtpAffx.224695.1.S1_s_atpmrna43500hypothetical protein-1e-5At4g04500protein kinase family proteinC.G.S.X.
0.042e-965PtpAffx.224765.1.S1_atpmrna43602hypothetical protein-2e-5At4g27300S-locus protein kinase, putativeC.G.S.X.
0.032e-965PtpAffx.224694.1.S1_atpmrna43498hypothetical protein-4e-6At4g11530kinaseC.G.S.X.
0.044e-861PtpAffx.225762.1.S1_s_atpmrna45341hypothetical protein-1e-8At4g23230protein kinase family proteinC.G.S.X.
0.036e-757PtpAffx.225497.1.S1_atpmrna44882hypothetical protein-4e-25At1g11300ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.122e-656Arabidopsis thalianaAt4g03230828018ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:cellular_component unknown;MPOBFVA---C.G.S.X.
0.061e-759Glycine maxGmaAffx.72107.1.S1_atBE805798--4e-3At4g38830protein kinase family proteinC.G.S.X.
0.053e-654Hordeum vulgareContig25378_atContig25378--9e-18At4g21390B120C.G.S.X.
0.041e-554Oryza sativaOs04g0631800AF403126.1-Receptor-like protein kinase 51e-6At3g45860receptor-like protein kinase, putativeC.G.S.X.
0.036e-344Triticum aestivumTaAffx.131904.1.S1_atCA647728--3e-4At4g23230protein kinase family proteinC.G.S.X.
0.044e-136Vitis vinifera1620080_atCB345665hypothetical protein LOC100252174-5e-3At4g23230protein kinase family proteinC.G.S.X.
0.023e-344Zea maysZm.16280.1.A1_atCO527119receptor-like kinase-4e-13At4g21390B120C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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