Gene omics information

Query gene ID PtpAffx.224904.1.S1_at
Gene name tir-nbs-lrr resistance protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4774.6PtpAffx.224904.1.S1_atpmrna43828tir-nbs-lrr resistance protein-2e-4At1g66090disease resistance protein (TIR-NBS class), putativeS.X.H.G.
0.2543.6PtpAffx.63706.2.A1_a_atCV274554hypothetical protein-2e+1At4g29273LCR23 (Low-molecular-weight cysteine-rich 23)S.X.H.G.
0.1626.9PtpAffx.202211.1.S1_atpmrna4430hypothetical protein-1e-1At2g34990zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1016.3PtpAffx.130676.1.S1_s_atBU876334hypothetical protein-1e-15At1g14060-S.X.H.G.
0.0914.6PtpAffx.9817.2.S1_atDN497979--5e-3At2g19780leucine-rich repeat family protein / extensin family proteinS.X.H.G.
0.0914.6PtpAffx.202840.1.S1_atpmrna5626hypothetical protein-4e+0At5g20020RAN2S.X.H.G.
0.046.9PtpAffx.215847.1.S1_atpmrna30264hypothetical protein-3e-1At5g20100unknown proteinS.X.H.G.
0.035.2PtpAffx.205253.1.S1_atpmrna10414hypothetical protein-7e-116At5g23110zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.399.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
8.398.5GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.897.4GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.395.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.293.5GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.892.1GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
2.490.4GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.249e-23109PtpAffx.224540.1.S1_s_atpmrna43164nls-tir-nbs-lrr resistance protein-1e-2At1g69550disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.126e-1893PtpAffx.225153.1.S1_atpmrna44288--2e-3At5g46260disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.206e-1893PtpAffx.224922.1.S1_atpmrna43849nls-tir-nbs-lrr resistance protein-4e-3At5g36930disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.306e-1893PtpAffx.224149.1.S1_atpmrna42410tir-nbs-lrr resistance protein-5e-5At5g36930disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.259e-1789PtpAffx.225514.1.S1_x_atpmrna44918hypothetical protein-3e-1At5g27290unknown proteinC.G.S.X.
0.339e-1789PtpAffx.224905.1.S1_s_atpmrna43829tir-nbs-lrr resistance protein /// tir-nbs-lrr resistance protein-1e-5At5g18360disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.311e-1585PtpAffx.224909.1.S1_s_atpmrna43833tir-nbs-lrr resistance protein /// tir-nbs-lrr resistance protein /// tir-nbs-lrr resistance protein /// hypothetical protein-2e-1At1g72930TIR (TOLL/INTERLEUKIN-1 RECEPTOR-LIKE)C.G.S.X.
0.152e-1481PtpAffx.224833.1.S1_s_atpmrna43712tir-nbs-lrr resistance protein /// tir-nbs-lrr resistance protein-5e-5At1g72890disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.258e-1479PtpAffx.225711.1.S1_atpmrna45268hypothetical protein-5e-6At4g08450disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-448Arabidopsis thalianaAt1g66090842923disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMF---C.G.S.X.
0.041e+036Glycine maxGma.8706.1.S1_atBU762562--2e-1At2g20142transmembrane receptorC.G.S.X.
0.026e+032Hordeum vulgareContig20316_atContig20316--1e+0At4g02725unknown proteinC.G.S.X.
0.022e+036Oryza sativaOsAffx.27799.1.S1_at---0C.G.S.X.
0.021e+132Triticum aestivumTaAffx.72015.2.S1_atCA729789--2e+1At5g18362unknown proteinC.G.S.X.
0.036e-238Vitis vinifera1619287_atAY427081.1--4e+0At5g63150unknown proteinC.G.S.X.
0.021e+034Zea maysZmAffx.1466.1.S1_at11990232-33--4e-16Atcg00530-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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