Gene omics information

Query gene ID PtpAffx.224333.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.224333.1.S1_x_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)S.X.H.G.
0.9199.2PtpAffx.224333.1.S1_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)S.X.H.G.
0.5078.6PtpAffx.203780.1.S1_atpmrna7465hypothetical protein-1e-4At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinS.X.H.G.
0.3357.5Ptp.7764.1.S1_atDN489656hypothetical protein-5e+0At5g49170unknown proteinS.X.H.G.
0.3357.5Ptp.7632.1.S1_atDN497977ZIP transporter-2e-1At5g59520ZIP2S.X.H.G.
0.1932.7Ptp.7158.1.S1_atCV246958--8e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.299.3GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
11.399.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
10.699.0GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
9.498.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
8.698.6GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
6.497.7GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
5.396.9GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001691PtpAffx.224333.1.S1_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.9301449PtpAffx.225117.1.S1_x_atpmrna44226hypothetical protein-1e-1At5g07000ST2B (SULFOTRANSFERASE 2B)C.G.S.X.
0.200958PtpAffx.225118.1.S1_atpmrna44227hypothetical protein-5e-5At1g18590SOT17 (SULFOTRANSFERASE 17)C.G.S.X.
0.530636PtpAffx.225342.1.S1_x_atpmrna44626hypothetical protein-1e-4At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.530636PtpAffx.225342.1.S1_s_atpmrna44626hypothetical protein-1e-4At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.470636PtpAffx.224334.1.S1_atpmrna42788--1e-4At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.466e-149527PtpAffx.81589.1.A1_s_atCV281331hypothetical protein-8e-3At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)C.G.S.X.
0.688e-102371PtpAffx.224130.1.S1_s_atpmrna42377hypothetical protein-1e-1At1g28170sulfotransferase family proteinC.G.S.X.
0.688e-102371PtpAffx.224130.1.S1_atpmrna42377hypothetical protein-1e-1At1g28170sulfotransferase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-138Arabidopsis thalianaAt1g74090843749SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.---C.G.S.X.
0.046e-446Glycine maxGma.6643.2.S1_atBE023121--1e-7At5g07010ST2A (SULFOTRANSFERASE 2A)C.G.S.X.
0.028e-134Hordeum vulgareContig13666_atContig13666--7e-2At3g105723-phosphoinositide-dependent protein kinase-1, putativeC.G.S.X.
0.023e+034Oryza sativaOs05g05118009633.m04056-Proteinase inhibitor I4, serpin family protein2e+0At4g24026unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.25959.1.A1_atCD454813--8e-1At1g25330basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.111e-446Vitis vinifera1610983_atCB970564hypothetical LOC100246453-3e-2At1g18590SOT17 (SULFOTRANSFERASE 17)C.G.S.X.
0.023e+032Zea maysZm.3916.1.S1_atCF349135hypothetical protein LOC100277396-2e+0At4g04460aspartyl protease family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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