Gene omics information

Query gene ID PtpAffx.224314.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.224314.1.S1_atpmrna42754hypothetical protein-4e-4At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedS.X.H.G.
0.4673.7PtpAffx.45649.1.S1_atCK090925hypothetical protein-3e-1At2g22475GEM (GL2-EXPRESSION MODULATOR)S.X.H.G.
0.069.8PtpAffx.201566.1.S1_s_atpmrna3072hypothetical protein-2e+0At3g14210ESM1 (epithiospecifier modifier 1)S.X.H.G.
0.058.3PtpAffx.80839.1.S1_atCV267772hypothetical protein-7e-60At4g24160hydrolase, alpha/beta fold family proteinS.X.H.G.
0.035.2PtpAffx.201062.1.S1_atpmrna2096hypothetical protein-3e-61At3g26932DRB3 (dsRNA-binding protein 3)S.X.H.G.
0.023.6PtpAffx.3704.1.S1_atCV254514hypothetical protein-4e-64At5g54960PDC2 (pyruvate decarboxylase-2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.499.3GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
10.098.9GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
7.398.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.995.1GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.992.5GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.389.8GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.680928PtpAffx.45649.1.S1_atCK090925hypothetical protein-3e-1At2g22475GEM (GL2-EXPRESSION MODULATOR)C.G.S.X.
0.492e-117422PtpAffx.76893.1.A1_atCV245861hypothetical protein-9e-2At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.459e-80297PtpAffx.128588.1.S1_atCX179215hypothetical protein-3e-1At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.324e-54212PtpAffx.94784.1.A1_atCV271800--1e+0At4g33920protein phosphatase 2C family protein / PP2C family proteinC.G.S.X.
0.155e-446PtpAffx.224180.1.S1_atpmrna42478hypothetical protein-1e-4At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.023e-240Ptp.4080.1.A1_s_atCV239227hypothetical protein-9e-9At5g60340maoC-like dehydratase domain-containing proteinC.G.S.X.
0.021e-138PtpAffx.25334.1.S1_atCV258568hypothetical protein-3e-15At2g22475GEM (GL2-EXPRESSION MODULATOR)C.G.S.X.
0.021e-138PtpAffx.25334.1.S1_a_atCV258568hypothetical protein-3e-15At2g22475GEM (GL2-EXPRESSION MODULATOR)C.G.S.X.
0.025e-136PtpAffx.7213.1.S1_atCV233028hypothetical protein-4e-1At1g30280heat shock protein bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-446Arabidopsis thalianaAt5g13200831159GRAM domain-containing protein / ABA-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO---C.G.S.X.
0.104e-550Glycine maxGmaAffx.46603.1.S1_atBM527724--4e-5At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.111e-550Hordeum vulgareHC112E03_T3_s_atHC112E03_T3ABA-responsive protein-1e-3At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.032e-138Oryza sativaOs06g0218100AK058667.1-Hypothetical protein2e-3At1g28200FIP1 (FH INTERACTING PROTEIN 1)C.G.S.X.
0.064e-136Triticum aestivumTaAffx.132322.1.S1_atCK212886--8e-6At5g23350GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.057e+030Vitis vinifera1622752_atCF214629hypothetical protein LOC100242373-1e+0At1g12663-C.G.S.X.
0.046e-134Zea maysZm.10778.2.A1_atBQ539551--3e-6At2g22475GEM (GL2-EXPRESSION MODULATOR)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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