Gene omics information

Query gene ID PtpAffx.224186.1.S1_at
Gene name tir-nbs-lrr resistance protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1PtpAffx.224186.1.S1_atpmrna42489tir-nbs-lrr resistance protein-5e-2At2g03030Toll-Interleukin-Resistance (TIR) domain-containing proteinS.X.H.G.
0.5380.5PtpAffx.108254.1.A1_atCV247853hypothetical protein-9e-1At3g07425unknown proteinS.X.H.G.
0.4067.0PtpAffx.102151.1.A1_atCV235637hypothetical protein-4e+0At2g17850-S.X.H.G.
0.2950.5PtpAffx.212325.1.S1_s_atpmrna24169--4e-1At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)S.X.H.G.
0.2543.6Ptp.6396.1.S1_atDN492082hypothetical protein-4e-8At4g34700complex 1 family protein / LVR family proteinS.X.H.G.
0.2340.5PtpAffx.54801.2.A1_atCV257003hypothetical protein-2e-1At3g1874060S ribosomal protein L30 (RPL30C)S.X.H.G.
0.2238.3Ptp.3907.1.S1_atBU866164--3e-1At3g18700-S.X.H.G.
0.2136.5PtpAffx.225153.1.S1_atpmrna44288--2e-3At5g46260disease resistance protein (TIR-NBS-LRR class), putativeS.X.H.G.
0.2034.6PtpAffx.7042.1.S1_atBI123470--2e+0At5g40382cytochrome-c oxidaseS.X.H.G.
0.1830.8PtpAffx.218039.1.S1_atpmrna33551hypothetical protein-1e-8At2g37680-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.295.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.295.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.195.5GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
3.995.1GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
3.393.7GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.193.2GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8401269PtpAffx.225146.1.S1_atpmrna44279tir-nbs-lrr resistance protein-2e-1At1g54730sugar transporter, putativeC.G.S.X.
0.472e-20101PtpAffx.225147.1.S1_atpmrna44280tir-nbs-lrr resistance protein-2e-1At5g51630disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.108e-859PtpAffx.215076.1.S1_atpmrna29041--3e+0At5g65495unknown proteinC.G.S.X.
0.025e-654PtpAffx.225454.1.S1_atpmrna44811tir-nbs-lrr resistance protein-3e-2At1g72840ATP binding / protein binding / transmembrane receptorC.G.S.X.
0.025e-654PtpAffx.225454.1.S1_x_atpmrna44811tir-nbs-lrr resistance protein-3e-2At1g72840ATP binding / protein binding / transmembrane receptorC.G.S.X.
0.032e-552PtpAffx.225153.1.S1_atpmrna44288--2e-3At5g46260disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.022e-552PtpAffx.225184.1.S1_atpmrna44338tir-nbs-lrr resistance protein-5e-7At1g72860disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.022e-552PtpAffx.224956.1.S1_atpmrna43898tir-nbs-lrr resistance protein-4e-2At4g16940ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptorC.G.S.X.
0.033e-448PtpAffx.225804.1.S1_atpmrna45406tir-nbs-lrr resistance protein-4e-4At5g45050TTR1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-240Arabidopsis thalianaAt2g03030814832Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBO---C.G.S.X.
0.035e-344Glycine maxGmaAffx.87687.1.S1_s_atBQ454046resistance protein KR3-3e+0At5g65925unknown proteinC.G.S.X.
0.021e-138Hordeum vulgarerbags13e14_s_atrbags13e14--2e+0At3g10790F-box family proteinC.G.S.X.
0.022e+036Oryza sativaOs.54352.1.S1_at---0C.G.S.X.
0.023e+034Triticum aestivumTaAffx.7739.1.S1_atCA651653--1e-3At1g55680WD-40 repeat family proteinC.G.S.X.
0.086e-238Vitis vinifera1608197_atCF512469hypothetical protein LOC100263726-1e+0At3g55515RTFL7 (ROTUNDIFOLIA LIKE 7)C.G.S.X.
0.023e-136Zea maysZm.5560.1.S1_atAY106940.1hypothetical protein LOC100279306-4e+0At5g03120unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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