Gene omics information

Query gene ID PtpAffx.224180.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.224180.1.S1_atpmrna42478hypothetical protein-1e-4At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedS.X.H.G.
0.6791.1PtpAffx.208173.1.S1_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)S.X.H.G.
0.5582.2PtpAffx.208173.1.S1_x_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)S.X.H.G.
0.3153.7PtpAffx.208983.1.S1_s_atpmrna17803hypothetical protein-3e-2At1g68765IDA (INFLORESCENCE DEFICIENT IN ABSCISSION)S.X.H.G.
0.058.3PtpAffx.204743.1.S1_atpmrna9337hypothetical protein-3e-1At5g46030unknown proteinS.X.H.G.
0.035.2PtpAffx.212032.1.S1_atpmrna23624hypothetical protein-1e-1At1g29720protein kinase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.799.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
11.799.2GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
11.099.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
10.599.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.697.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.156e-446PtpAffx.224314.1.S1_atpmrna42754hypothetical protein-4e-4At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.032e-344PtpAffx.153622.1.A1_s_atCV249906hypothetical protein-1e+0At5g59990-C.G.S.X.
0.032e-138PtpAffx.224000.1.S1_atpmrna42229hypothetical protein-9e-13At5g02010ROPGEF7C.G.S.X.
0.026e-136PtpAffx.98818.1.A1_s_atCK096644hypothetical protein-1e-20At2g47790transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.026e-136PtpAffx.30698.1.S1_atCV264325hypothetical protein-2e-3At1g73000-C.G.S.X.
0.036e-136PtpAffx.29131.2.S1_atCK096515hypothetical protein-1e-3At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.026e-136PtpAffx.206101.1.S1_s_atpmrna12090hypothetical protein-3e-36At5g04160phosphate translocator-relatedC.G.S.X.
0.026e-136PtpAffx.206101.1.S1_atpmrna12090hypothetical protein-3e-36At5g04160phosphate translocator-relatedC.G.S.X.
0.026e-136PtpAffx.140586.1.A1_atCV252581--1e+0At5g48655zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-448Arabidopsis thalianaAt5g13200831159GRAM domain-containing protein / ABA-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO---C.G.S.X.
0.224e-859Glycine maxGmaAffx.46603.1.S1_atBM527724--4e-5At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.032e-136Hordeum vulgareHW08F16V_x_atHW08F16V--6e-7At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.035e-240Oryza sativaOs12g0478200AK063578.1-GRAM domain containing protein4e-4At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.033e-240Triticum aestivumTa.28587.3.S1_x_atCN010440--9e-4At4g01600GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.045e-134Vitis vinifera1614372_atCF515488hypothetical protein LOC100246424-2e-15At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.027e-134Zea maysZm.9191.1.A1_atBM350157hypothetical protein LOC100279424-6e-4At4g40100ABA-responsive protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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