Gene omics information

Query gene ID PtpAffx.224082.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7292.7PtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)S.X.H.G.
0.7493.8PtpAffx.219164.1.S1_atpmrna35006hypothetical protein-2e+1Atmg00840-S.X.H.G.
0.7493.8PtpAffx.208647.1.S1_atpmrna17166hypothetical protein-7e-7At1g13160SDA1 family proteinS.X.H.G.
0.6791.1PtpAffx.214632.1.S1_atpmrna28429hypothetical protein-4e+0At5g03510zinc finger (C2H2 type) family proteinS.X.H.G.
0.6488.4PtpAffx.220458.1.S1_atpmrna36851hypothetical protein-7e+0At1g49170unknown proteinS.X.H.G.
0.6287.2PtpAffx.224029.1.S1_atpmrna42263hypothetical protein-1e+0At5g4152040S ribosomal protein S10 (RPS10B)S.X.H.G.
0.5683.9PtpAffx.205115.1.S1_atpmrna10125hypothetical protein-8e-1At4g32120galactosyltransferase family proteinS.X.H.G.
0.5582.2PtpAffx.222801.1.S1_atpmrna40461hypothetical protein-5e-1At3g22360AOX1BS.X.H.G.
0.5279.4Ptp.3190.3.A1_atCV229036--7e-1At1g50930unknown proteinS.X.H.G.
0.4673.7PtpAffx.217474.1.S1_atpmrna32753hypothetical protein-7e+0At3g18295unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
60.5100.0GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.796.3GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.995.1GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
1.886.4GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.785.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.785.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.583.5GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.583.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
1.381.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.381.0GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.609e-75280PtpAffx.200210.1.S1_x_atpmrna396hypothetical protein-9e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.609e-75280PtpAffx.200210.1.S1_atpmrna396hypothetical protein-9e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.192e-1789PtpAffx.153433.1.A1_atCV257246hypothetical protein-3e-1At2g38880NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)C.G.S.X.
0.194e-961PtpAffx.203440.1.S1_atpmrna6858hypothetical protein-3e-1At2g38880NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)C.G.S.X.
0.066e-238PtpAffx.200211.1.S1_s_atpmrna397hypothetical protein-3e+0At5g50470NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)C.G.S.X.
0.066e-238PtpAffx.200211.1.S1_atpmrna397hypothetical protein-3e+0At5g50470NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)C.G.S.X.
0.079e-134PtpAffx.209599.1.S1_atpmrna18984hypothetical protein-6e-2At5g50375CPI1 (CYCLOPROPYL ISOMERASE)C.G.S.X.
0.039e-134PtpAffx.205504.1.S1_atpmrna10880hypothetical protein-1e-1At1g36390co-chaperone grpE family proteinC.G.S.X.
0.033e+032PtpAffx.84165.1.A1_s_atCK096674hypothetical protein-2e-24At1g19440KCS4 (3-KETOACYL-COA SYNTHASE 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-240Arabidopsis thalianaAt5g61030836224GR-RBP3 (glycine-rich RNA-binding protein 3)encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.---C.G.S.X.
0.043e+032Glycine maxHgAffx.3401.1.S1_atCK349289--3e+0At5g46530-C.G.S.X.
0.035e+030Hordeum vulgareContig40_x_atContig40histone H3 protein-3e-32At5g10980histone H3C.G.S.X.
0.041e+034Oryza sativaOs.54758.1.S1_at---0C.G.S.X.
0.056e-134Triticum aestivumTaAffx.81128.1.S1_atCA689253--1e-2At5g11020ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.043e+030Vitis vinifera1619628_atCF405403hypothetical protein LOC100265808-3e-1At3g15000-C.G.S.X.
0.041e+032Zea maysZmAffx.1294.1.S1_at40794996-137--0Atmg01270-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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