Gene omics information

Query gene ID PtpAffx.223651.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1PtpAffx.223651.1.S1_atpmrna41743hypothetical protein-2e-1At1g80030DNAJ heat shock protein, putativeS.X.H.G.
0.2645.2PtpAffx.212507.1.S1_x_atpmrna24495--7e+0At5g56170-S.X.H.G.
0.2543.6PtpAffx.221449.1.S1_x_atpmrna38344--1e+1At5g37475translation initiation factor-relatedS.X.H.G.
0.2136.5PtpAffx.205560.1.S1_atpmrna10994hypothetical protein-2e-1At5g61930APO3 (ACCUMULATION OF PHOTOSYSTEM ONE 3)S.X.H.G.
0.1932.7PtpAffx.103705.1.A1_atCK095622--1e-1At3g2339060S ribosomal protein L36a/L44 (RPL36aA)S.X.H.G.
0.1729.1PtpAffx.29126.1.A1_atDN487657--7e+0At5g08050-S.X.H.G.
0.1626.9PtpAffx.203506.1.S1_s_atpmrna6972hypothetical protein-3e+0At5g17610unknown proteinS.X.H.G.
0.1321.6PtpAffx.20305.1.A1_atCK091221--1e-4At5g20060phospholipase/carboxylesterase family proteinS.X.H.G.
0.1118.1PtpAffx.209890.1.S1_atpmrna19488hypothetical protein-8e-1At5g23120HCF136S.X.H.G.
0.0914.6PtpAffx.24608.1.A1_atCV253804AP2/ERF domain-containing transcription factor-2e-3At1g36060AP2 domain-containing transcription factor, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.199.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
7.298.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
4.596.1GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.791.8GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.691.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.241e-42173PtpAffx.221497.1.S1_atpmrna38406hypothetical protein-2e-74At1g80030DNAJ heat shock protein, putativeC.G.S.X.
0.029e-134PtpAffx.85736.1.S1_atDN491290hypothetical protein-8e-25At5g15310ATMYB16 (MYB DOMAIN PROTEIN 16)C.G.S.X.
0.029e-134PtpAffx.211325.1.S1_atpmrna22204hypothetical protein-7e-17At2g20800NDB4 (NAD(P)H dehydrogenase B4)C.G.S.X.
0.029e-134PtpAffx.207240.1.S1_atpmrna14351hypothetical protein-2e-1At5g26673-C.G.S.X.
0.019e-134PtpAffx.202415.1.S1_atpmrna4851multidrug/pheromone exporter, MDR family, ABC transporter family-4e-51At2g47000ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)C.G.S.X.
0.013e+032PtpAffx.224266.1.S1_atpmrna42670nbs-lrr resistance protein-4e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.013e+032PtpAffx.224267.1.S1_atpmrna42671nbs-lrr resistance protein-4e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.023e+032PtpAffx.214243.1.S1_atpmrna27708hypothetical protein-4e-2At2g04880ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1)C.G.S.X.
0.013e+032PtpAffx.20296.1.A1_atCV258041--4e-31At1g21880LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-136Arabidopsis thalianaAt1g80030844343DNAJ heat shock protein, putativeF:unfolded protein binding, heat shock protein binding, ATP binding;P:protein folding, response to heat;C:chloroplast thylakoid membrane, chloroplast;OBMFPAV---C.G.S.X.
0.049e-134Glycine maxPsAffx.C1508000001_atPsAffx.C1508000001--2e+0At4g25260invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.031e+032Hordeum vulgareContig13094_s_atContig13094--6e+0At5g52750heavy-metal-associated domain-containing proteinC.G.S.X.
0.021e+034Oryza sativaOs09g0103100CR283151-AB-hydrolase associated lipase region domaincontaining protein2e-1At2g15230ATLIP1 (Arabidopsis thaliana lipase 1)C.G.S.X.
0.056e-134Triticum aestivumTaAffx.87444.1.S1_atCA604897--6e-1At3g26660LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24)C.G.S.X.
0.041e-238Vitis vinifera1621726_atCF211619hypothetical protein LOC100259432-1e-40At3g59810small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativeC.G.S.X.
0.041e+032Zea maysZm.11678.1.S1_atBM379888hydrolase, hydrolyzing O-glycosyl compounds-4e+0At1g17560HLL (HUELLENLOS)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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