Gene omics information

Query gene ID PtpAffx.223327.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1PtpAffx.223327.1.S1_atpmrna41264hypothetical protein-1e-39At4g19230CYP707A1S.X.H.G.
0.7192.6PtpAffx.91597.1.S1_atDN496124hypothetical protein-1e+0At4g31860protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.6791.1PtpAffx.161948.1.A1_atCK092884hypothetical protein-1e+0At1g27695glycine-rich proteinS.X.H.G.
0.6388.1PtpAffx.16889.1.S1_atCV239404hypothetical protein-4e-2At4g01680MYB55 (myb domain protein 55)S.X.H.G.
0.6086.0Ptp.3954.1.S1_a_atBP936963hypothetical protein-3e-52At1g64980unknown proteinS.X.H.G.
0.5984.9PtpAffx.19956.1.S1_atCK096932hypothetical protein-2e-17At5g65140trehalose-6-phosphate phosphatase, putativeS.X.H.G.
0.5683.9PtpAffx.201017.1.S1_atpmrna1995hypothetical protein-2e-13At3g27220kelch repeat-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.799.9GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
23.899.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
16.399.6GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
1.583.5GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.381.0GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.178.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.163e-1687PtpAffx.215819.1.S1_atpmrna30231cytochrome P450-1e-42At3g19270CYP707A4C.G.S.X.
0.097e-1479PtpAffx.32849.1.S1_atBU813715cytochrome P450-5e-7At4g19230CYP707A1C.G.S.X.
0.092e-861PtpAffx.202059.1.S1_atpmrna4108cytochrome P450-6e-20At3g19270CYP707A4C.G.S.X.
0.092e-861PtpAffx.202059.1.S1_x_atpmrna4108cytochrome P450-6e-20At3g19270CYP707A4C.G.S.X.
0.042e-861PtpAffx.112212.1.S1_atBI068960cytochrome P450-5e-8At4g19230CYP707A1C.G.S.X.
0.033e-757PtpAffx.225598.1.S1_atpmrna45054cytochrome P450-8e-7At5g36130cytochrome P450 familyC.G.S.X.
0.071e-656PtpAffx.155137.1.S1_atCK114181cytochrome P450-6e-22At3g19270CYP707A4C.G.S.X.
0.072e-552PtpAffx.80069.1.S1_s_atDN501927cytochrome P450-1e-13At3g19270CYP707A4C.G.S.X.
0.072e-552PtpAffx.80069.1.S1_atDN501927hypothetical protein-1e-13At3g19270CYP707A4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.471e-39165Arabidopsis thalianaAt4g19230827663CYP707A1Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.---C.G.S.X.
0.218e-2099Glycine maxGmaAffx.82642.4.S1_s_atBI974036abscisic acid 8'-hydroxylase-9e-10At4g19230CYP707A1C.G.S.X.
0.096e-652Hordeum vulgareContig11708_atContig11708--1e-1At4g19230CYP707A1C.G.S.X.
0.076e-963Oryza sativaOs02g0703600AK067007.1-Cytochrome P450 90C1 (EC 1.14.-.-) (ROTUNDIFOLIA3)2e-2At4g19230CYP707A1C.G.S.X.
0.091e-1481Triticum aestivumTa.22981.3.S1_a_atBJ291883--1e-6At4g19230CYP707A1C.G.S.X.
0.298e-32137Vitis vinifera1621989_atCD006576--3e-21At4g19230CYP707A1C.G.S.X.
0.129e-1167Zea maysZm.7780.1.A1_atCD433445hypothetical protein LOC100274595-1e-7At4g19230CYP707A1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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