Gene omics information

Query gene ID PtpAffx.223136.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4067.0PtpAffx.223136.1.S1_atpmrna40986hypothetical protein-5e-18At1g49050aspartyl protease family proteinS.X.H.G.
0.6086.0PtpAffx.202897.1.S1_atpmrna5733hypothetical protein-3e-6At3g13980unknown proteinS.X.H.G.
0.5582.2Ptp.670.1.A1_atCK087317hypothetical protein-6e-1At5g14740CA2 (CARBONIC ANHYDRASE 2)S.X.H.G.
0.4471.9PtpAffx.95850.1.A1_atCV230444hypothetical protein-4e-1At5g25560zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4067.0PtpAffx.4889.5.A1_atCV267649--3e-5At3g62930glutaredoxin family proteinS.X.H.G.
0.3863.7PtpAffx.21178.1.S1_atBU887045hypothetical protein-1e+0At5g61210SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.1100.0GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
15.699.5GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
4.596.1GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.691.3GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.691.3GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.785.5GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.583.5GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
1.279.6GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.400860PtpAffx.18489.1.A1_s_atCV245016hypothetical protein-5e-3At1g49050aspartyl protease family proteinC.G.S.X.
0.016e-344PtpAffx.11499.5.A1_atCV257896hypothetical protein-4e-10At4g00850GIF3 (GRF1-INTERACTING FACTOR 3)C.G.S.X.
0.012e-242PtpAffx.208156.1.S1_atpmrna16217hypothetical protein-3e-3At3g22480prefoldin-related KE2 family proteinC.G.S.X.
0.011e-140PtpAffx.208970.1.S1_atpmrna17779hypothetical protein-1e-19At1g25550myb family transcription factorC.G.S.X.
0.011e-140PtpAffx.11499.2.A1_atCV225401--1e-1At1g09560GLP5 (GERMIN-LIKE PROTEIN 5)C.G.S.X.
0.014e-138PtpAffx.205352.1.S1_atpmrna10597hypothetical protein-6e-67At5g67030ABA1 (ABA DEFICIENT 1)C.G.S.X.
0.014e-138PtpAffx.201561.1.S1_atpmrna3065hypothetical protein-3e-1At1g15100RHA2AC.G.S.X.
0.014e-138PtpAffx.112109.1.S1_atCK091062--2e-10At1g31310hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.012e+036PtpAffx.97934.1.A1_atCV273942hypothetical protein-2e-66At2g22780PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.175e-1893Arabidopsis thalianaAt1g49050841328aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFO---C.G.S.X.
0.093e-1481Glycine maxGmaAffx.49768.1.S1_atBG046595--3e+0At4g30070LCR59 (Low-molecular-weight cysteine-rich 59)C.G.S.X.
0.074e-1479Hordeum vulgareContig5110_atContig5110nucellin-like aspartic protease-like-2e-2At4g33490aspartic-type endopeptidaseC.G.S.X.
0.092e-1689Oryza sativaOs02g0730700AK072199.1-Peptidase A1, pepsin family protein4e-6At1g49050aspartyl protease family proteinC.G.S.X.
0.011e+036Triticum aestivumTa.11057.1.A1_atBQ168457--4e+0At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)C.G.S.X.
0.192e-36153Vitis vinifera1619684_atCD715182--1e-10At1g49050aspartyl protease family proteinC.G.S.X.
0.078e-652Zea maysZm.5774.1.S1_atCK370317hypothetical protein LOC100280323-7e-5At1g49050aspartyl protease family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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