Gene omics information

Query gene ID PtpAffx.223043.1.S1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.223043.1.S1_atpmrna40832--2e-4At1g32970subtilase family proteinS.X.H.G.
0.5078.6PtpAffx.211107.1.S1_x_atpmrna21820hypothetical protein-2e+0At2g31620receptor-like protein kinase-relatedS.X.H.G.
0.3357.5PtpAffx.5285.1.A1_s_atCV254744hypothetical protein-1e+0At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)S.X.H.G.
0.3357.5Ptp.457.2.S1_atCK089199hypothetical protein-8e-1At3g59360UTR6 (UDP-GALACTOSE TRANSPORTER 6)S.X.H.G.
0.1525.3PtpAffx.218039.1.S1_atpmrna33551hypothetical protein-1e-8At2g37680-S.X.H.G.
0.069.8PtpAffx.213729.1.S1_atpmrna26794hypothetical protein-5e+0At4g29033-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.999.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.295.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.894.9GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.393.7GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.188.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.271e-21105PtpAffx.150591.1.S1_atCK107057hypothetical protein-1e+0At5g01570unknown proteinC.G.S.X.
0.011e-346PtpAffx.224739.1.S1_atpmrna43556hypothetical protein-1e-15At5g45650subtilase family proteinC.G.S.X.
0.024e-344PtpAffx.204248.1.S1_atpmrna8355hypothetical protein-2e-2At1g20150subtilase family proteinC.G.S.X.
0.012e-242PtpAffx.58457.1.S1_atCK104855GRAS family transcription factor-6e-5At2g37650scarecrow-like transcription factor 9 (SCL9)C.G.S.X.
0.012e-242PtpAffx.58457.1.S1_s_atCK104855GRAS family transcription factor-6e-5At2g37650scarecrow-like transcription factor 9 (SCL9)C.G.S.X.
0.022e-242PtpAffx.224221.1.S1_atpmrna42571hypothetical protein-1e-3At2g04160AIR3C.G.S.X.
0.052e-242PtpAffx.210124.1.S1_atpmrna19948--5e-2At4g10520subtilase family proteinC.G.S.X.
0.012e-242PtpAffx.207712.1.S1_atpmrna15322GRAS family transcription factor-9e-5At2g37650scarecrow-like transcription factor 9 (SCL9)C.G.S.X.
0.017e-240PtpAffx.206123.1.S1_atpmrna12142hypothetical protein-5e-25At2g41830cyclin-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-448Arabidopsis thalianaAt1g32970840191subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM---C.G.S.X.
0.032e-242Glycine maxGma.8457.1.S1_atAY033772.1subtilisin-type protease precursor-8e-5At1g20160ATSBT5.2C.G.S.X.
0.021e+034Hordeum vulgarerbags22o03_atrbags22o03--1e+0At4g38850SAUR15 (SMALL AUXIN UPREGULATED 15)C.G.S.X.
0.052e-242Oryza sativaOs01g0795400AK101715.1-Subtilase4e-4At2g19170SLP3C.G.S.X.
0.048e-136Triticum aestivumTaAffx.5095.1.S1_atCA723107--8e-1At1g54950unknown proteinC.G.S.X.
0.024e-342Vitis vinifera1620551_s_atCB339855hypothetical protein LOC100266698-4e+0At5g23212-C.G.S.X.
0.011e+034Zea maysZm.4820.1.A1_a_atBG319643hypothetical protein LOC100192684-1e-35At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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