Gene omics information

Query gene ID PtpAffx.222861.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3863.7PtpAffx.222861.1.S1_atpmrna40552hypothetical protein-1e+0At3g47020F-box family proteinS.X.H.G.
0.1525.3PtpAffx.212474.1.S1_atpmrna24438--1e-1At4g30670unknown proteinS.X.H.G.
0.1423.5PtpAffx.206321.1.S1_atpmrna12547hypothetical protein-2e-2At3g06000leucine-rich repeat family proteinS.X.H.G.
0.0914.6PtpAffx.223229.1.S1_atpmrna41110hypothetical protein-1e+0At1g23810paired amphipathic helix repeat-containing proteinS.X.H.G.
0.0711.6PtpAffx.218422.1.S1_atpmrna34029hypothetical protein-7e-8At5g67060HEC1 (HECATE 1)S.X.H.G.
0.058.3PtpAffx.217656.1.S1_atpmrna33008hypothetical protein-1e+1At3g16700fumarylacetoacetate hydrolase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.799.6GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
7.698.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.597.8GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.397.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.996.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.095.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.003e-91333PtpAffx.222861.1.S1_x_atpmrna40552hypothetical protein-1e+0At3g47020F-box family proteinC.G.S.X.
0.558e-55212PtpAffx.217472.1.S1_atpmrna32751hypothetical protein-7e-1At1g08570ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4)C.G.S.X.
0.098e-1579PtpAffx.112170.1.S1_atAJ768529hypothetical protein-4e-30At1g17050SPS2 (Solanesyl diphosphate synthase 2)C.G.S.X.
0.131e-1065PtpAffx.145426.1.S1_atBU811944hypothetical protein-1e+0At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)C.G.S.X.
0.034e-134Ptp.2345.1.S1_atBI128997hypothetical protein-8e-12At2g38710AMMECR1 familyC.G.S.X.
0.022e+032PtpAffx.223259.1.S1_atpmrna41163hypothetical protein-1e-8At1g33980Smg-4/UPF3 family proteinC.G.S.X.
0.022e+032PtpAffx.221726.1.S1_atpmrna38760hypothetical protein-3e+0At5g65740protein binding / zinc ion bindingC.G.S.X.
0.022e+032PtpAffx.221726.1.S1_s_atpmrna38760hypothetical protein-3e+0At5g65740protein binding / zinc ion bindingC.G.S.X.
0.022e+032PtpAffx.219180.1.S1_atpmrna35028hypothetical protein-2e-5At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+032Arabidopsis thalianaAt3g47020823855F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.052e+032Glycine maxGmaAffx.42864.1.S1_atCA799427--2e-1At4g38860auxin-responsive protein, putativeC.G.S.X.
0.046e-132Hordeum vulgareContig11406_atContig11406--3e-1At4g16790hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.036e-134Oryza sativaOs01g0559200AK102611.1-Hypothetical protein4e-2At2g46140late embryogenesis abundant protein, putative / LEA protein, putativeC.G.S.X.
0.055e+030Triticum aestivumTaAffx.86620.1.S1_atCA604366--4e-3At3g60640ATG8G (AUTOPHAGY 8G)C.G.S.X.
0.044e-132Vitis vinifera1618644_atCD005517--1e-40At5g57440GS1C.G.S.X.
0.045e-132Zea maysZm.9081.1.A1_atBM340497--4e-1At5g51510unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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