Gene omics information

Query gene ID PtpAffx.222762.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7794.9PtpAffx.222762.1.S1_atpmrna40401hypothetical protein-4e-7At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinS.X.H.G.
0.1423.5PtpAffx.6389.1.A1_atCV281498hypothetical protein-6e-1At5g16770AtMYB9 (myb domain protein 9)S.X.H.G.
0.058.3PtpAffx.148941.1.S1_atAJ779465hypothetical protein-3e-8At5g32440-S.X.H.G.
0.035.2PtpAffx.211136.1.S1_s_atpmrna21877hypothetical protein-2e-27At3g03560unknown proteinS.X.H.G.
0.012.2PtpAffx.27692.3.A1_a_atCV258377hypothetical protein-7e-52At4g17270Mo25 family proteinS.X.H.G.
0.012.2PtpAffx.96160.1.S1_atCV245761--3e-2At3g56480myosin heavy chain-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.596.1GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.995.1GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.293.5GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
3.293.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
2.590.9GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-136PtpAffx.224722.1.S1_atpmrna43534hypothetical protein-1e-12At4g21390B120C.G.S.X.
0.035e-136PtpAffx.209460.1.S1_atpmrna18749SAUR family protein-1e-3At2g24400auxin-responsive protein, putative / small auxin up RNA (SAUR_D)C.G.S.X.
0.025e-136PtpAffx.201152.1.S1_atpmrna2263hypothetical protein-3e-83At3g21060transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.032e+034PtpAffx.56200.1.A1_atCV273917--3e-1At2g11910unknown proteinC.G.S.X.
0.022e+034PtpAffx.294.1.S1_s_atBP932735f-box family protein-6e-1At1g06475unknown proteinC.G.S.X.
0.012e+034PtpAffx.224524.1.S1_atpmrna43143beta-ketoacyl-coa synthase family protein-1e-21At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
0.022e+034PtpAffx.214024.1.S1_atpmrna27311hypothetical protein-4e-1At1g02330-C.G.S.X.
0.012e+034PtpAffx.210589.1.S1_atpmrna20764hypothetical protein-3e-31At5g63120ethylene-responsive DEAD box RNA helicase, putative (RH30)C.G.S.X.
0.022e+034PtpAffx.209090.1.S1_atpmrna17978hypothetical protein-8e-10At3g17180scpl33 (serine carboxypeptidase-like 33)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.164e-756Arabidopsis thalianaAt3g05170819681phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;BFOPMA---C.G.S.X.
0.035e-136Glycine maxGmaAffx.70372.1.S1_atCA935227--3e+0At5g33421unknown proteinC.G.S.X.
0.037e-134Hordeum vulgareContig20429_atContig20429--4e-1At3g25180CYP82G1C.G.S.X.
0.033e+034Oryza sativaOs12g04122009640.m02115--3e-1At3g57670NTT (NO TRANSMITTING TRACT)C.G.S.X.
0.042e+034Triticum aestivumTaAffx.128678.2.S1_atBJ307909--1e+0At5g17070unknown proteinC.G.S.X.
0.054e-134Vitis vinifera1618989_atBM437572hypothetical protein LOC100258700-1e+0At1g67785unknown proteinC.G.S.X.
0.031e-240Zea maysZm.19118.1.A1_atCO522834hypothetical protein LOC100274224-6e+0At5g10130pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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