Gene omics information

Query gene ID PtpAffx.222720.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0PtpAffx.222720.1.S1_atpmrna40317hypothetical protein-7e+0At5g38344transmembrane receptorS.X.H.G.
0.2543.6PtpAffx.153759.2.A1_atCV244625--3e-1At5g54980integral membrane family proteinS.X.H.G.
0.1423.5PtpAffx.43824.1.S1_atCV257164hypothetical protein-3e-11At5g64200ATSC35S.X.H.G.
0.1423.5PtpAffx.216715.1.S1_a_atpmrna31674hypothetical protein-3e-1At1g10270GRP23 (GLUTAMINE-RICH PROTEIN23)S.X.H.G.
0.046.9PtpAffx.202384.1.S1_atpmrna4786hypothetical protein-2e-125At2g47330DEAD/DEAH box helicase, putativeS.X.H.G.
0.035.2PtpAffx.142.1.S1_s_atCV253962hypothetical protein-2e-3At1g10390nucleoporin family proteinS.X.H.G.
0.023.6PtpAffx.211215.1.S1_atpmrna22034hypothetical protein-2e-29At5g54870unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.199.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
5.497.0GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.396.9GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
3.894.9GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.694.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.092.9GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-134PtpAffx.210666.1.S1_atpmrna20917hypothetical protein-4e-1At3g13500unknown proteinC.G.S.X.
0.016e-134PtpAffx.208070.1.S1_atpmrna16028hypothetical protein-7e-30At1g23230unknown proteinC.G.S.X.
0.016e-134PtpAffx.205134.1.S1_atpmrna10163hypothetical protein-0At5g63960EMB2780 (EMBRYO DEFECTIVE 2780)C.G.S.X.
0.072e+032PtpAffx.37974.1.A1_atCV231652--2e+0At4g22810DNA-binding protein-relatedC.G.S.X.
0.012e+032PtpAffx.224133.1.S1_atpmrna42381cc-nbs-lrr resistance protein-2e-3At4g01160BTB/POZ domain-containing proteinC.G.S.X.
0.022e+032PtpAffx.222290.1.S1_s_atpmrna39606hypothetical protein-3e+0At1g53910RAP2.12C.G.S.X.
0.022e+032PtpAffx.222290.1.S1_atpmrna39606hypothetical protein-3e+0At1g53910RAP2.12C.G.S.X.
0.012e+032PtpAffx.211358.1.S1_atpmrna22263hypothetical protein-2e-21At1g06900catalytic/ metal ion binding / metalloendopeptidase/ zinc ion bindingC.G.S.X.
0.022e+032PtpAffx.204487.1.S1_atpmrna8805cytochrome P450-2e-1At1g78490CYP708A3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+030Arabidopsis thalianaAt5g383443771359transmembrane receptorF:transmembrane receptor activity;P:signal transduction, innate immune response;C:intrinsic to membrane, endomembrane system;PM---C.G.S.X.
0.052e+032Glycine maxGma.14183.1.A1_atCD417154--3e+0At4g32660AME3C.G.S.X.
0.052e-134Hordeum vulgarebaak13l10_s_atbaak13l10--1e+0At1g71470unknown proteinC.G.S.X.
0.058e-134Oryza sativaOs05g02850509633.m01901--3e+0At4g21540SPHK1 (SPHINGOSINE KINASE 1)C.G.S.X.
0.052e+032Triticum aestivumTaAffx.31747.1.S1_atCA608611--4e+0At3g28120unknown proteinC.G.S.X.
0.065e-132Vitis vinifera1609114_atCF201212.1--3e+0At5g39581unknown proteinC.G.S.X.
0.033e+030Zea maysZm.2455.1.A1_atBM416746SET domain protein 110-5e+0At4g24420RNA recognition motif (RRM)-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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