Gene omics information

Query gene ID PtpAffx.222555.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6991.5PtpAffx.222555.1.S1_atpmrna40070hypothetical protein-2e+0At1g54740-S.X.H.G.
0.6791.1PtpAffx.29085.1.A1_s_atDN489411--4e+0At1g75700HVA22G (HVA22-LIKE PROTEIN G)S.X.H.G.
0.5582.2PtpAffx.220781.1.S1_atpmrna37212cytochrome P450-2e+0At2g19850-S.X.H.G.
0.5279.4Ptp.7099.1.S1_s_atBU810141hypothetical protein-4e+0At5g40430MYB22 (myb domain protein 22)S.X.H.G.
0.4875.4PtpAffx.201290.1.S1_atpmrna2561hypothetical protein-7e-16At5g55820unknown proteinS.X.H.G.
0.4673.7PtpAffx.222091.1.S1_x_atpmrna39304hypothetical protein-5e-26Atcg00660-S.X.H.G.
0.4369.7PtpAffx.87978.1.S1_s_atCX170242leucine-rich repeat protein kinase-1e-38At5g62230ERL1 (ERECTA-LIKE 1)S.X.H.G.
0.4167.7PtpAffx.101690.1.A1_atCV255238--9e-1At5g41401unknown proteinS.X.H.G.
0.3964.6PtpAffx.64701.1.S1_x_atCV236236histone 2-3e-45At2g38810HTA8 (HISTONE H2A 8)S.X.H.G.
0.3863.7PtpAffx.64701.2.S1_atCX184746histone 2-6e-12At3g54560HTA11S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.6100.0GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
6.397.7GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.193.2GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.188.6GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.987.2GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.785.5GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.684.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+032PtpAffx.219432.1.S1_atpmrna35353hypothetical protein-3e+0At5g41890GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.012e+032PtpAffx.214374.1.S1_atpmrna27972hypothetical protein-5e-28At2g18900transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.012e+032PtpAffx.214374.1.S1_s_atpmrna27972hypothetical protein-5e-28At2g18900transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.039e+030PtpAffx.56073.2.S1_atAJ775641hypothetical protein-6e-22At2g17530protein kinase family proteinC.G.S.X.
0.009e+030PtpAffx.222855.1.S1_atpmrna40538cytochrome P450-2e-5At3g56630CYP94D2C.G.S.X.
0.039e+030PtpAffx.200357.1.S1_atpmrna715hypothetical protein-2e+0At5g27370unknown proteinC.G.S.X.
0.034e+128PtpAffx.79234.1.S1_atDN489309hypothetical protein-2e-13At1g27120galactosyltransferase family proteinC.G.S.X.
0.044e+128PtpAffx.65236.1.A1_atCK087944hypothetical protein-2e-1At5g19630unknown proteinC.G.S.X.
0.034e+128PtpAffx.65135.1.A1_atCK093957--1e+0At1g32410vacuolar protein sorting 55 family protein / VPS55 family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+032Arabidopsis thalianaAt1g54740841915-F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBF---C.G.S.X.
0.052e+032Glycine maxPsAffx.CL797Contig1_atPsAffx.CL797Contig1--3e+0At4g00525unknown proteinC.G.S.X.
0.058e-132Hordeum vulgareContig2430_atContig2430--2e-1At2g45930unknown proteinC.G.S.X.
0.051e+130Oryza sativaOsAffx.26089.1.S1_at---0C.G.S.X.
0.085e-134Triticum aestivumTaAffx.121228.1.S1_atBG907241--6e-3At3g08640alphavirus core protein familyC.G.S.X.
0.058e+028Vitis vinifera1622607_atAF271662.1hypothetical protein LOC100250080-1e-8At2g36830GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.051e+128Zea maysZmAffx.1544.1.S1_s_at11990232-111--2e-16Atcg00820-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage