Gene omics information

Query gene ID PtpAffx.221575.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.221575.1.S1_atpmrna38527hypothetical protein-2e-11At5g23990FRO5 (FERRIC REDUCTION OXIDASE 5)S.X.H.G.
0.3863.7PtpAffx.77102.1.S1_atCV239221hypothetical protein-2e-44At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)S.X.H.G.
0.3661.6Ptp.2447.1.S1_atCK093683hypothetical protein-1e+1At5g10140FLC (FLOWERING LOCUS C)S.X.H.G.
0.3357.5PtpAffx.47432.1.S1_s_atBU815065NAC domain protein, IPR003441 /// NAC domain protein, IPR003441-1e-9At5g22380anac090 (Arabidopsis NAC domain containing protein 90)S.X.H.G.
0.2950.5PtpAffx.200701.1.S1_s_atpmrna1352NAC domain protein, IPR003441 /// NAC domain protein, IPR003441-4e-4At3g44350anac061 (Arabidopsis NAC domain containing protein 61)S.X.H.G.
0.2950.5PtpAffx.4010.2.A1_a_atCV254509hypothetical protein-9e-8At2g27080harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedS.X.H.G.
0.2645.2PtpAffx.223981.1.S1_s_atpmrna42208hypothetical protein-2e-1At3g30845unknown proteinS.X.H.G.
0.2543.6PtpAffx.30967.3.S1_atCX187005hypothetical protein-9e-11At2g35710glycogenin glucosyltransferase (glycogenin)-relatedS.X.H.G.
0.2238.3PtpAffx.50868.1.A1_atCV229374hypothetical protein-2e-12At2g27080harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedS.X.H.G.
0.2136.5Ptp.4210.1.S1_atBU826578--6e-2At5g35120unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.6100.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
13.299.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
1.684.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8601972PtpAffx.204014.1.S1_atpmrna7917hypothetical protein-5e-9At5g23990FRO5 (FERRIC REDUCTION OXIDASE 5)C.G.S.X.
0.074e-757PtpAffx.221574.1.S1_atpmrna38526hypothetical protein-1e-3At1g01580FRO2 (FERRIC REDUCTION OXIDASE 2)C.G.S.X.
0.072e-656PtpAffx.204015.1.S1_atpmrna7918hypothetical protein-1e-6At1g01580FRO2 (FERRIC REDUCTION OXIDASE 2)C.G.S.X.
0.096e-654PtpAffx.211561.1.S1_atpmrna22656hypothetical protein-3e-1At1g01590FRO1 (FERRIC REDUCTION OXIDASE 1)C.G.S.X.
0.019e-240PtpAffx.4554.1.A1_atCV229233hypothetical protein-5e+0At5g64830programmed cell death 2 C-terminal domain-containing proteinC.G.S.X.
0.011e+036PtpAffx.76441.2.A1_a_atCV230422hypothetical protein-1e+1At5g64490bindingC.G.S.X.
0.011e+036PtpAffx.205196.1.S1_atpmrna10290hypothetical protein-2e-14At4g39810exonuclease/ nucleic acid bindingC.G.S.X.
0.016e+034PtpAffx.58146.1.S1_atCV261342hypothetical protein-6e-63At5g08080SYP132 (SYNTAXIN OF PLANTS 132)C.G.S.X.
0.016e+034PtpAffx.556.4.S1_atCV271097hypothetical protein-3e-80At4g38970fructose-bisphosphate aldolase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.172e-1171Arabidopsis thalianaAt5g23990832464FRO5 (FERRIC REDUCTION OXIDASE 5)Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons.---C.G.S.X.
0.011e+036Glycine maxGma.4757.2.S1_atAW234074MYB transcription factor MYB82-1e-11At5g12870MYB46 (MYB DOMAIN PROTEIN 46)C.G.S.X.
0.012e+034Hordeum vulgarerbags16j18_s_atrbags16j18--3e+0At4g39140protein binding / zinc ion bindingC.G.S.X.
0.015e-138Oryza sativaOs03g0607200AK070268.1-Gibberellin regulated protein family protein2e+0At1g49830ethylene-responsive protein -relatedC.G.S.X.
0.023e-138Triticum aestivumTaAffx.111552.2.S1_atCA638023--3e+0At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
0.021e+034Vitis vinifera1619103_s_atCF206471.1hypothetical protein LOC100256831-7e-1At2g33330PDLP3 (PLASMODESMATA-LOCATED PROTEIN 3)C.G.S.X.
0.012e+034Zea maysZm.2478.2.A1_atAI737453Hypothetical protein LOC100191471-7e-2At5g60490FLA12C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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