Gene omics information

Query gene ID PtpAffx.221378.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2PtpAffx.221378.1.S1_atpmrna38249hypothetical protein-9e-1At5g18040unknown proteinS.X.H.G.
0.4369.7PtpAffx.58826.1.A1_atCK089170--5e-1At2g34620mitochondrial transcription termination factor-related / mTERF-relatedS.X.H.G.
0.3357.5PtpAffx.225085.1.S1_s_atpmrna44181hypothetical protein-4e+0At5g65274-S.X.H.G.
0.2747.1PtpAffx.217512.1.S1_x_atpmrna32805hypothetical protein-3e-1At5g58590RANBP1 (RAN BINDING PROTEIN 1)S.X.H.G.
0.2747.1PtpAffx.147231.1.A1_atCV244696--1e+0At3g50860clathrin adaptor complex small chain family proteinS.X.H.G.
0.1016.3PtpAffx.206207.1.S1_atpmrna12328hypothetical protein-1e-2At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
30.499.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
10.499.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
9.998.9GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
8.398.5GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.898.0GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.694.5GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.092.9GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.691.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.490.4GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-28127PtpAffx.224118.1.S1_atpmrna42357hypothetical protein-5e+0At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)C.G.S.X.
0.033e-448PtpAffx.220208.1.S1_atpmrna36565hypothetical protein-5e+0At3g01340protein transport protein SEC13 family protein / WD-40 repeat family proteinC.G.S.X.
0.028e-240PtpAffx.216934.1.S1_s_atpmrna32010hypothetical protein-3e-7At5g49830-C.G.S.X.
0.018e-240PtpAffx.209473.1.S1_atpmrna18787hypothetical protein-8e-48At5g49830-C.G.S.X.
0.011e+036Ptp.896.1.A1_atCK090143hypothetical protein-7e-2At2g44900armadillo/beta-catenin repeat family protein / F-box family proteinC.G.S.X.
0.015e+034PtpAffx.29903.1.S1_atCV262559hypothetical protein-2e+0At3g45820unknown proteinC.G.S.X.
0.015e+034PtpAffx.223483.1.S1_atpmrna41512hypothetical protein-8e+0At5g59820RHL41 (RESPONSIVE TO HIGH LIGHT 41)C.G.S.X.
0.015e+034PtpAffx.219907.1.S1_atpmrna36070hypothetical protein-4e+0At2g31700unknown proteinC.G.S.X.
0.015e+034PtpAffx.212460.1.S1_atpmrna24413hypothetical protein-1e-15At5g58320kinase interacting protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.019e-136Arabidopsis thalianaAt5g18040831925unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P---C.G.S.X.
0.023e-138Glycine maxPsAffx.CL1447Contig1_s_atPsAffx.CL1447Contig1--7e-1At3g4991060S ribosomal protein L26 (RPL26A)C.G.S.X.
0.022e+034Hordeum vulgareContig8464_atContig8464--3e+0At5g07840ankyrin repeat family proteinC.G.S.X.
0.014e-138Oryza sativaOsAffx.30374.2.S1_at---0C.G.S.X.
0.022e-138Triticum aestivumTaAffx.23899.1.S1_atCA728695--1e-3At1g15760-C.G.S.X.
0.011e+034Vitis vinifera1618096_s_atBQ794769ripening-related protein-like-6e+0At2g16340unknown proteinC.G.S.X.
0.022e+034Zea maysZm.4077.1.S1_x_atAY105154.1--9e-7At3g07880Rho GDP-dissociation inhibitor family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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