Gene omics information

Query gene ID PtpAffx.221342.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7292.7PtpAffx.221342.1.S1_atpmrna38177hypothetical protein-1e-20At4g10000electron carrier/ protein disulfide oxidoreductaseS.X.H.G.
0.5984.9Ptp.5990.1.S1_atCV281006--5e-29At2g42220rhodanese-like domain-containing proteinS.X.H.G.
0.5683.9Ptp.1181.1.S1_s_atCK089795cytochrome P450 fatty acid hydroperoxide lyase-3e+0At4g28180unknown proteinS.X.H.G.
0.5582.2Ptp.5942.1.S1_x_atCV283216peroxiredoxin-9e-46At3g26060ATPRX QS.X.H.G.
0.5279.4Ptp.5948.1.S1_atCV262999hypothetical protein-2e+0At5g40370glutaredoxin, putativeS.X.H.G.
0.5078.6PtpAffx.147900.1.S1_s_atAJ779369hypothetical protein-1e-3At1g56085-S.X.H.G.
0.4471.9PtpAffx.212881.1.S1_x_atpmrna25209hypothetical protein-4e-7At4g24930thylakoid lumenal 17.9 kDa protein, chloroplastS.X.H.G.
0.4369.7PtpAffx.86388.1.S1_atCX167974cytochrome P450 fatty acid hydroperoxide lyase-1e-4At2g22100RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.3052.0PtpAffx.1263.1.A1_a_atCV237429hypothetical protein-4e-1At5g08050-S.X.H.G.
0.2747.1Ptp.1746.1.A1_atCV236183hypothetical protein-2e+0At5g17790VAR3 (VARIEGATED 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.296.8GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.296.8GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.196.8GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.196.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.696.2GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.395.8GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.095.3GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.095.3GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.095.3GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.191e-88327PtpAffx.249.22.A1_a_atCV272359--1e-1At4g10000electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.191e-88327PtpAffx.249.22.A1_x_atCV272359--1e-1At4g10000electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.143e-37157PtpAffx.6271.1.S1_atCV240407--2e+0At2g31710unknown proteinC.G.S.X.
0.022e-138PtpAffx.58813.1.A1_atCK090185heavy metal ATPase-5e+0Atcg00470-C.G.S.X.
0.022e-138Ptp.7534.1.S1_atCF233591hypothetical protein-4e-5At1g15770unknown proteinC.G.S.X.
0.022e-138Ptp.7534.1.S1_s_atCF233591hypothetical protein-4e-5At1g15770unknown proteinC.G.S.X.
0.017e-136PtpAffx.201432.1.S1_atpmrna2828--2e-42At5g24740-C.G.S.X.
0.023e+034PtpAffx.68917.3.S1_atCV279059hypothetical protein-5e+0At3g47610transcription regulator/ zinc ion bindingC.G.S.X.
0.023e+034PtpAffx.4599.1.A1_atCV227174hypothetical protein-4e-1At2g29050ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.331e-20101Arabidopsis thalianaAt4g10000826591electron carrier/ protein disulfide oxidoreductaseF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:chloroplast;BOPAFM---C.G.S.X.
0.371e-26121Glycine maxGmaAffx.81084.1.S1_atBE612024--2e-21At4g10000electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.272e-23109Hordeum vulgareContig10506_atContig10506--1e-7At4g10000electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.021e+036Oryza sativaOs03g0734400CB966465-Ribosomal protein L7/L12 family protein2e+0At1g02710glycine-rich proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.79953.1.S1_atCA705194--3e-1At5g33330RNase H domain-containing proteinC.G.S.X.
0.141e-32139Vitis vinifera1621408_atBQ798831hypothetical protein LOC100244724-5e+0Atmg01370-C.G.S.X.
0.162e-26119Zea maysZm.19167.1.A1_a_atAI629472hypothetical protein LOC100194096-1e-17At4g10000electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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