Gene omics information

Query gene ID PtpAffx.221100.1.S1_at
Gene name AP2/ERF domain-containing transcription factor
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8196.1PtpAffx.221100.1.S1_atpmrna37697AP2/ERF domain-containing transcription factor-9e-20At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.7895.1PtpAffx.221103.1.S1_atpmrna37700--7e-5At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.7694.3PtpAffx.146622.1.A1_atCV269348--3e-2At2g27690CYP94C1S.X.H.G.
0.7192.6PtpAffx.204806.1.S1_atpmrna9474hypothetical protein-2e-2At5g12340unknown proteinS.X.H.G.
0.6891.3PtpAffx.59348.1.S1_atCA928346hypothetical protein-3e-1At5g08370AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2)S.X.H.G.
0.6791.1PtpAffx.54562.1.A1_atCV243605AP2/ERF domain-containing transcription factor-8e-31At5g51990CBF4 (C- REPEAT-BINDING FACTOR 4)S.X.H.G.
0.6791.1PtpAffx.93687.1.S1_atBP927882AP2/ERF domain-containing transcription factor-1e+0At1g71450AP2 domain-containing transcription factor, putativeS.X.H.G.
0.6488.4PtpAffx.204670.1.S1_atpmrna9194AP2/ERF domain-containing transcription factor-7e-9At1g43160RAP2.6 (related to AP2 6)S.X.H.G.
0.6287.2PtpAffx.8577.2.A1_atCV256116--2e-31At4g08950EXO (EXORDIUM)S.X.H.G.
0.5984.9PtpAffx.138857.1.A1_atBP930260cytochrome P450-4e+0At3g04040unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
52.4100.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
16.199.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
6.597.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.295.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.389.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
1.076.2GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
0.563.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.459.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
0.459.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.234e-29129PtpAffx.221101.1.S1_atpmrna37698AP2/ERF domain-containing transcription factor-6e-12At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.262e-27123PtpAffx.221102.1.S1_atpmrna37699AP2/ERF domain-containing transcription factor-2e-1At3g23230ethylene-responsive factor, putativeC.G.S.X.
0.252e-1273PtpAffx.221103.1.S1_atpmrna37700--7e-5At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.153e-1169PtpAffx.203341.1.S1_s_atpmrna6649AP2/ERF domain-containing transcription factor-3e-7At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.063e-859PtpAffx.108947.1.S1_atDN484132AP2/ERF domain-containing transcription factor-5e-4At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.061e-757PtpAffx.31347.1.A1_atCV239271AP2/ERF domain-containing transcription factor-4e-8At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.081e-757Ptp.866.1.S1_atCK093360AP2/ERF domain-containing transcription factor-6e-7At1g28160ethylene-responsive element-binding family proteinC.G.S.X.
0.081e-757Ptp.866.1.S1_s_atCK093360AP2/ERF domain-containing transcription factor-6e-7At1g28160ethylene-responsive element-binding family proteinC.G.S.X.
0.072e-654PtpAffx.203625.1.S1_atpmrna7185AP2/ERF domain-containing transcription factor-2e-30At5g19790RAP2.11 (related to AP2 11)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.199e-2097Arabidopsis thalianaAt2g44840819093ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.133e-859Glycine maxGma.68.1.S1_atAF357211.1ethylene-responsive element binding protein 1-7e-9At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)C.G.S.X.
0.059e-340Hordeum vulgareContig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.074e-859Oryza sativaOs04g04290509632.m03363--4e-1At5g07310AP2 domain-containing transcription factor, putativeC.G.S.X.
0.043e-136Triticum aestivumTaAffx.16192.1.S1_atBQ169008--1e-8At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.064e-444Vitis vinifera1613698_atCF403989hypothetical protein LOC100242632-7e-6At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.053e-238Zea maysZm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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