Gene omics information

Query gene ID PtpAffx.220631.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.220631.1.S1_atpmrna37041hypothetical protein-7e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyS.X.H.G.
0.9199.2PtpAffx.224460.1.S1_x_atpmrna43015hypothetical protein-6e-1At2g38780unknown proteinS.X.H.G.
0.9199.2PtpAffx.225048.1.S1_atpmrna44125hypothetical protein-2e-1At1g48980oxidoreductaseS.X.H.G.
0.9199.2PtpAffx.7770.1.A1_atCA934754--4e+0At1g58460unknown proteinS.X.H.G.
0.8397.0PtpAffx.13927.1.S1_atCX660204hypothetical protein-2e-6At5g19300-S.X.H.G.
0.7794.9PtpAffx.140514.1.A1_atCV255394--2e-1At1g13080CYP71B2 (CYTOCHROME P450 71B2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
75.2100.0GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
8.198.5GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
7.898.4GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
0.666.6GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
0.666.6GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
0.459.5GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
0.459.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
0.249.7GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.249.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
0.249.7GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.613e-158557PtpAffx.205103.1.S1_atpmrna10105hypothetical protein-1e+0At1g36732CPuORF19 (Conserved peptide upstream open reading frame 19)C.G.S.X.
0.581e-98359PtpAffx.216949.1.S1_x_atpmrna32028hypothetical protein-3e-1At1g79230MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)C.G.S.X.
0.625e-92337PtpAffx.219095.1.S1_atpmrna34914hypothetical protein-3e+0At5g25810tny (TINY)C.G.S.X.
0.623e-87321PtpAffx.221240.1.S1_x_atpmrna37980hypothetical protein-8e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.652e-75282PtpAffx.217167.1.S1_atpmrna32319hypothetical protein-7e-1At5g60142DNA bindingC.G.S.X.
0.584e-74278PtpAffx.223855.1.S1_x_atpmrna42074hypothetical protein-8e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.575e-58224PtpAffx.215175.1.S1_atpmrna29218hypothetical protein-3e+0At5g17140cysteine proteinase-relatedC.G.S.X.
0.542e-51202PtpAffx.217106.1.S1_x_atpmrna32248hypothetical protein-6e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.627e-51200PtpAffx.217617.1.S1_x_atpmrna32957hypothetical protein-6e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-134Arabidopsis thalianaAt3g46940823847deoxyuridine 5'-triphosphate nucleotidohydrolase familyF:hydrolase activity, dUTP diphosphatase activity;P:2'-deoxyribonucleotide metabolic process, dUTP metabolic process;C:cellular_component unknown;BOVMFPA---C.G.S.X.
0.041e+034Glycine maxGmaAffx.46855.1.S1_atBQ612842--9e-4At2g04740ankyrin repeat family proteinC.G.S.X.
0.053e-134Hordeum vulgareContig4173_atContig4173--2e-1At4g01700chitinase, putativeC.G.S.X.
0.051e+034Oryza sativaOsAffx.23121.1.S1_at---0C.G.S.X.
0.062e-136Triticum aestivumTaAffx.85640.1.S1_atCA620951--8e+0At5g28090unknown proteinC.G.S.X.
0.048e-132Vitis vinifera1620218_atCF405310hypothetical protein LOC100262456-1e+0At1g64490unknown proteinC.G.S.X.
0.032e-238Zea maysZm.3353.1.A1_atAI947755toc64-4e-1At3g09120unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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