Gene omics information

Query gene ID PtpAffx.219819.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.219819.1.S1_atpmrna35948hypothetical protein-8e-27At1g79620leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.058.3PtpAffx.15827.1.S1_atCK090433hypothetical protein-1e+0At5g26805unknown proteinS.X.H.G.
0.058.3PtpAffx.201664.1.S1_atpmrna3318hypothetical protein-5e-1At5g45870Bet v I allergen family proteinS.X.H.G.
0.058.3PtpAffx.11857.1.S1_atCV249729hypothetical protein-1e+0At1g23530unknown proteinS.X.H.G.
0.046.9Ptp.3187.1.S1_atCF229431hypothetical protein-2e-16At1g67510leucine-rich repeat family proteinS.X.H.G.
0.023.6PtpAffx.35137.1.S1_atDN493135hypothetical protein-2e+0At2g03460-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.698.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
8.398.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
5.897.4GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.597.1GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.393.7GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8803467PtpAffx.213753.1.S1_s_atpmrna26859hypothetical protein-5e-25At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.8803467PtpAffx.213753.1.S1_atpmrna26859hypothetical protein-5e-25At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.370958PtpAffx.1287.1.A1_s_atCV233886hypothetical protein-1e-7At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.500749PtpAffx.208035.1.S1_atpmrna15951hypothetical protein-3e-9At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.075e-38161PtpAffx.95889.1.A1_atCV228885hypothetical protein-2e-1At1g14540anionic peroxidase, putativeC.G.S.X.
0.133e-24115PtpAffx.208911.1.S1_atpmrna17675hypothetical protein-1e+0At2g03010unknown proteinC.G.S.X.
0.044e-1171PtpAffx.74807.1.S1_atCV225788--5e-11At5g49760leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.021e-759PtpAffx.213740.1.S1_atpmrna26823hypothetical protein-2e-8At1g06840leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.035e-757PtpAffx.216104.1.S1_atpmrna30684hypothetical protein-8e-45At5g54380THE1 (THESEUS1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.238e-27123Arabidopsis thalianaAt1g79620844301leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA---C.G.S.X.
0.081e-450Glycine maxGmaAffx.16523.1.S1_atCD411170--4e+0At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)C.G.S.X.
0.053e-654Hordeum vulgareContig12884_atContig12884--9e-9At1g06840leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.093e-21105Oryza sativaOs01g0816600NM_191078.1-Protein kinase domain containing protein3e-7At5g49780ATP binding / kinase/ protein serine/threonine kinaseC.G.S.X.
0.042e-656Triticum aestivumTa.7511.1.S1_atCA652130--2e-10At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.362e-142506Vitis vinifera1609428_atCF215282hypothetical protein LOC100257037-1e-14At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.011e-242Zea maysZm.382.1.S1_atCF020226leucine-rich transmembrane protein kinase1-4e-16At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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