Gene omics information

Query gene ID PtpAffx.219686.1.S1_at
Gene name cytochrome P450
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3661.6PtpAffx.219686.1.S1_atpmrna35660cytochrome P450-1e+0At3g14650CYP72A11S.X.H.G.
0.4268.6PtpAffx.28818.1.S1_atBU812529--4e+0At4g14305-S.X.H.G.
0.3863.7PtpAffx.212939.1.S1_atpmrna25319hypothetical protein-2e-8At5g07380unknown proteinS.X.H.G.
0.3153.7PtpAffx.222656.1.S1_atpmrna40203hypothetical protein-4e-2At1g33340epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedS.X.H.G.
0.2950.5PtpAffx.203936.1.S1_atpmrna7766hypothetical protein-7e-1At3g06740zinc finger (GATA type) family proteinS.X.H.G.
0.2136.5PtpAffx.209579.1.S1_atpmrna18958hypothetical protein-2e-1At3g52150RNA recognition motif (RRM)-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.498.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
7.998.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
7.098.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.297.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.796.3GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.796.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.995.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.691.3GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.590.9GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.712e-104379PtpAffx.221999.1.S1_s_atpmrna39183cytochrome P450 /// cytochrome P450-3e+0At4g21920unknown proteinC.G.S.X.
0.712e-104379PtpAffx.221999.1.S1_atpmrna39183cytochrome P450-3e+0At4g21920unknown proteinC.G.S.X.
0.042e-344PtpAffx.209960.1.S1_s_atpmrna19645cytochrome P450 /// cytochrome P450-2e-4At1g11610CYP71A18C.G.S.X.
0.031e-138PtpAffx.201463.1.S1_atpmrna2880hypothetical protein-6e-3At5g39100GLP6 (GERMIN-LIKE PROTEIN 6)C.G.S.X.
0.031e-138PtpAffx.133887.1.A1_atCV257919--4e+0At5g51700PBS2 (PPHB SUSCEPTIBLE 2)C.G.S.X.
0.014e-136PtpAffx.91671.1.S1_atCV267166--3e-72At5g49020PRMT4A (PROTEIN ARGININE METHYLTRANSFERASE 4A)C.G.S.X.
0.024e-136PtpAffx.64674.1.S1_s_atCV255442hypothetical protein-5e-2At1g05420OFP12 (OVATE FAMILY PROTEIN 12)C.G.S.X.
0.034e-136PtpAffx.54366.1.A1_atCK087841hypothetical protein-7e-3At4g31820ENP (ENHANCER OF PINOID)C.G.S.X.
0.044e-136PtpAffx.111866.1.S1_atBU102300hypothetical protein-4e-11At3g54190-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt3g14650820693CYP72A11putative cytochrome P450---C.G.S.X.
0.063e-240Glycine maxGmaAffx.74241.1.S1_atBI786740--1e-6At1g75130CYP721A1C.G.S.X.
0.041e-136Hordeum vulgareHS18C23u_x_atHS18C23u--3e+0At2g33830dormancy/auxin associated family proteinC.G.S.X.
0.029e+032Oryza sativaOs06g06423009634.m04199--2e-4At3g26330CYP71B37C.G.S.X.
0.035e+032Triticum aestivumTaAffx.112950.1.S1_atCA619983--4e-6At5g01200myb family transcription factorC.G.S.X.
0.031e+032Vitis vinifera1612819_atCF568842--5e-15At3g58030zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.045e-134Zea maysZmAffx.1361.1.S1_at40794996-49--7e-1At3g10940protein phosphatase-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage