Gene omics information

Query gene ID PtpAffx.219661.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.219661.1.S1_atpmrna35628hypothetical protein-1e+1At4g36370unknown proteinS.X.H.G.
0.3863.7PtpAffx.217603.1.S1_atpmrna32937hypothetical protein-8e+0At3g62210EDA32 (embryo sac development arrest 32)S.X.H.G.
0.3661.6Ptp.1843.2.S1_atCK093338hypothetical protein-4e-1At2g35795DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.3153.7PtpAffx.219256.1.S1_atpmrna35121hypothetical protein-3e+0At1g53400unknown proteinS.X.H.G.
0.2950.5PtpAffx.225085.1.S1_s_atpmrna44181hypothetical protein-4e+0At5g65274-S.X.H.G.
0.2543.6PtpAffx.20217.1.A1_atCK095187--6e-1At1g59520CW7S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.699.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
13.299.4GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
9.598.8GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
6.998.0GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.495.9GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.195.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
1.785.5GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-344PtpAffx.214992.1.S1_atpmrna28930hypothetical protein-8e+0At3g12835unknown proteinC.G.S.X.
0.036e-240PtpAffx.218360.1.S1_atpmrna33939hypothetical protein-2e+1At5g62040brother of FT and TFL1 protein (BFT)C.G.S.X.
0.012e-138PtpAffx.41255.2.S1_atCK091345hypothetical protein-1e-5At2g01100unknown proteinC.G.S.X.
0.022e-138PtpAffx.220354.1.S1_atpmrna36732--3e+1At5g07840ankyrin repeat family proteinC.G.S.X.
0.012e-138PtpAffx.219418.1.S1_atpmrna35339hypothetical protein-4e+0At5g61930APO3 (ACCUMULATION OF PHOTOSYSTEM ONE 3)C.G.S.X.
0.019e-136PtpAffx.220968.1.S1_atpmrna37474hypothetical protein-5e+0At4g32272-C.G.S.X.
0.029e-136PtpAffx.219052.1.S1_atpmrna34850hypothetical protein-2e-1At2g15740zinc finger (C2H2 type) family proteinC.G.S.X.
0.019e-136PtpAffx.219056.1.S1_atpmrna34856hypothetical protein-2e+0At2g41440unknown proteinC.G.S.X.
0.029e-136PtpAffx.121024.1.A1_atCV240122hypothetical protein-1e-1At5g62480ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+132Arabidopsis thalianaAt4g36370829789unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.022e-138Glycine maxPsAffx.psZG007xK19f_atPsAffx.psZG007xK19f--9e-7At4g31420zinc finger (C2H2 type) family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig10342_atContig10342--1e+0At4g15640unknown proteinC.G.S.X.
0.036e-654Oryza sativaOs06g0106000AK105653.1-Septum site-determining protein MinD familyprotein3e+0At5g08410FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)C.G.S.X.
0.024e-240Triticum aestivumTaAffx.111397.1.S1_atCA641709--3e+0At1g66560WRKY64C.G.S.X.
0.023e+032Vitis vinifera1607595_atCB919699similar to serine/threonine protein phosphatase 1; PP1-5e-43At2g39840TOPP4C.G.S.X.
0.021e+034Zea maysZm.9970.1.A1_atBM348066--5e+0At5g59040COPT3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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