Gene omics information

Query gene ID PtpAffx.219584.1.S1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3661.6PtpAffx.219584.1.S1_atpmrna35542--3e+1At3g49540unknown proteinS.X.H.G.
0.1016.3PtpAffx.16539.1.A1_atBP934558--4e+0At3g05500rubber elongation factor (REF) family proteinS.X.H.G.
0.012.2PtpAffx.102228.1.A1_atCV232856fasciclin-like AGP 14.8 protein-1e+1At5g51090unknown proteinS.X.H.G.
0.012.2PtpAffx.219703.1.S1_atpmrna35689hypothetical protein-2e-3At1g19115unknown proteinS.X.H.G.
0.012.2PtpAffx.208349.1.S1_atpmrna16598hypothetical protein-8e-6At5g18920unknown proteinS.X.H.G.
0.012.2PtpAffx.225682.1.S1_atpmrna45210hypothetical protein-8e-16At5g66420-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.199.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
8.898.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.495.9GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.495.9GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
4.495.9GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.395.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-242PtpAffx.27269.1.A1_atCV255808hypothetical protein-4e-1At1g43171unknown proteinC.G.S.X.
0.054e-240PtpAffx.220158.1.S1_atpmrna36512hypothetical protein-2e+0At1g53935unknown proteinC.G.S.X.
0.024e-240PtpAffx.217989.1.S1_atpmrna33484hypothetical protein-5e-1At3g25577unknown proteinC.G.S.X.
0.031e-138PtpAffx.220460.1.S1_atpmrna36853hypothetical protein-3e+0At5g20570RBX1 (RING-BOX 1)C.G.S.X.
0.026e-136PtpAffx.223616.1.S1_atpmrna41686hypothetical protein-8e+0At4g13110BSD domain-containing proteinC.G.S.X.
0.032e+034PtpAffx.219328.1.S1_atpmrna35215hypothetical protein-1e+1At2g25890glycine-rich protein / oleosinC.G.S.X.
0.022e+034PtpAffx.219139.1.S1_atpmrna34973--3e+1At5g27910NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8)C.G.S.X.
0.022e+034PtpAffx.218867.1.S1_atpmrna34610--4e+0At1g02780emb2386 (embryo defective 2386)C.G.S.X.
0.032e+034PtpAffx.218154.1.S1_atpmrna33685hypothetical protein-1e-1At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+130Arabidopsis thalianaAt3g49540824116unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMFPVA---C.G.S.X.
0.036e-136Glycine maxPsAffx.C32000021_s_atPsAffx.C32000021--4e+0At1g15385unknown proteinC.G.S.X.
0.038e-134Hordeum vulgarerbaal1i09_atrbaal1i09--8e-1At4g27900-C.G.S.X.
0.032e-138Oryza sativaOs01g0358866NM_193998.1--4e+0At3g44950glycine-rich proteinC.G.S.X.
0.034e-136Triticum aestivumTaAffx.114165.1.S1_atCA597530--3e-1At4g25080CHLM (magnesium-protoporphyrin IX methyltransferase)C.G.S.X.
0.038e+030Vitis vinifera1620572_atCA816726--4e+0At5g01650macrophage migration inhibitory factor family protein / MIF family proteinC.G.S.X.
0.033e+032Zea maysZmAffx.682.1.A1_atAI734793--3e+0At1g27000bZIP family transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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