Gene omics information

Query gene ID PtpAffx.219256.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.219256.1.S1_atpmrna35121hypothetical protein-3e+0At1g53400unknown proteinS.X.H.G.
0.6791.1PtpAffx.217324.1.S1_atpmrna32538hypothetical protein-4e+0At5g64920CIP8 (COP1-INTERACTING PROTEIN 8)S.X.H.G.
0.5683.9PtpAffx.112707.1.A1_atDN486456--1e+1At5g01445unknown proteinS.X.H.G.
0.5078.6PtpAffx.219961.1.S1_atpmrna36144hypothetical protein-7e-10At1g30950UFO (UNUSUAL FLORAL ORGANS)S.X.H.G.
0.4067.0PtpAffx.225085.1.S1_s_atpmrna44181hypothetical protein-4e+0At5g65274-S.X.H.G.
0.2340.5PtpAffx.216428.1.S1_atpmrna31200hypothetical protein-1e+1At5g25280serine-rich protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
54.8100.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
10.599.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.697.2GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.494.0GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.490.4GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.088.0GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.178.0GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
1.076.2GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-859PtpAffx.222148.1.S1_atpmrna39389hypothetical protein-3e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.012e-242PtpAffx.219146.1.S1_atpmrna34983--3e+0At1g10960ATFD1 (FERREDOXIN 1)C.G.S.X.
0.012e-242PtpAffx.218735.1.S1_atpmrna34458--2e+1At5g11960unknown proteinC.G.S.X.
0.057e-240PtpAffx.220359.1.S1_atpmrna36737hypothetical protein-9e+0At1g0940012-oxophytodienoate reductase, putativeC.G.S.X.
0.027e-240PtpAffx.219020.1.S1_atpmrna34810hypothetical protein-2e+0At4g20520RNA binding / RNA-directed DNA polymeraseC.G.S.X.
0.043e-138PtpAffx.220760.1.S1_atpmrna37182hypothetical protein-4e+0At3g01690-C.G.S.X.
0.023e-138PtpAffx.219542.1.S1_atpmrna35489hypothetical protein-1e+1At5g44200CBP20 (CAP-BINDING PROTEIN 20)C.G.S.X.
0.023e-138PtpAffx.218066.1.S1_atpmrna33587hypothetical protein-2e+1At5g28463unknown proteinC.G.S.X.
0.013e-138PtpAffx.217991.1.S1_atpmrna33486hypothetical protein-8e+0At1g22680unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt1g53400841776unknown proteinF:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MPFO---C.G.S.X.
0.027e-240Glycine maxPsAffx.psZG006xO11f_s_atPsAffx.psZG006xO11f--3e+0At5g30341unknown proteinC.G.S.X.
0.029e-238Hordeum vulgareContig17425_atContig17425--4e-1At1g58150unknown proteinC.G.S.X.
0.021e+036Oryza sativaOsAffx.2921.1.S1_at---0C.G.S.X.
0.022e-138Triticum aestivumTa.1200.1.S1_atCA665158Xylanase inhibitor protein I-4e+1At5g42680unknown proteinC.G.S.X.
0.029e-134Vitis vinifera1619823_atCB969271hypothetical protein LOC100261518-1e-4At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.028e-238Zea maysZm.5701.1.S1_atBG841157AP-4 complex subunit sigma-1-7e-37At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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