CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID PtpAffx.219046.1.S1_s_at

Gene name cytochrome P450 /// cytochrome P450 /// cytochrome P450

Organism Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 86.0 PtpAffx.219046.1.S1_s_at pmrna34844 cytochrome P450 /// cytochrome P450 /// cytochrome P450 - 9e-2 At5g60530 late embryogenesis abundant protein-related / LEA protein-related S.X. H.G.
0.91 99.2 Ptp.7372.2.S1_a_at CV269484 hypothetical protein - 6e+0 At5g53420 - S.X. H.G.
0.73 93.6 PtpAffx.208409.1.S1_s_at pmrna16713 hypothetical protein - 9e-4 At1g69870 proton-dependent oligopeptide transport (POT) family protein S.X. H.G.
0.73 93.6 PtpAffx.22209.1.S1_at CK094003 - - 8e+0 At5g20165 unknown protein S.X. H.G.
0.40 67.0 PtpAffx.101934.1.A1_at CV244591 thioredoxin f - 5e-13 At5g16400 ATF2 S.X. H.G.
0.35 59.7 PtpAffx.210959.1.S1_x_at pmrna21534 hypothetical protein - 8e-23 At1g54570 esterase/lipase/thioesterase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.8 99.8 GSM372097 Clone3200_LPI5_N-_8w_rep1 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
13.7 99.4 GSM372098 Clone3200_LPI5_N-_8w_rep2 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
9.0 98.7 GSM372043 Clone1979_LPI5_N-_8w_rep2 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.1 98.5 GSM372093 Clone3200_LPI5_N+_4w_rep1 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.5 97.1 GSM372042 Clone1979_LPI5_N-_8w_rep1 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.9 96.5 GSM372100 Clone3200_LPI5_N+_8w_rep2 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.6 96.2 GSM372045 Clone1979_LPI5_N+_8w_rep2 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.5 96.1 GSM372094 Clone3200_LPI5_N+_4w_rep2 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.5 96.1 GSM372099 Clone3200_LPI5_N+_8w_rep1 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.8 94.9 GSM372095 Clone3200_LPI5_N-_4w_rep1 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 1352 PtpAffx.219046.1.S1_at pmrna34844 cytochrome P450 - 9e-2 At5g60530 late embryogenesis abundant protein-related / LEA protein-related C.G. S.X.
0.15 9e-18 91 Ptp.7062.1.S1_at CV270575 cytochrome P450 - 3e-1 At1g11610 CYP71A18 C.G. S.X.
0.20 6e-16 85 PtpAffx.224778.1.S1_x_at pmrna43624 cytochrome P450 /// cytochrome P450 - 7e-1 At1g11610 CYP71A18 C.G. S.X.
0.29 3e-14 79 PtpAffx.224566.1.S1_at pmrna43217 cytochrome P450 - 5e-2 At5g24960 CYP71A14 C.G. S.X.
0.03 5e-7 56 PtpAffx.225433.1.S1_at pmrna44780 cytochrome P450 - 3e-6 At3g26180 CYP71B20 C.G. S.X.
0.19 5e-7 56 PtpAffx.224780.1.S1_s_at pmrna43626 cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 - 6e-1 At1g11610 CYP71A18 C.G. S.X.
0.06 1e-4 48 PtpAffx.224593.1.S1_at pmrna43271 cytochrome P450 - 6e-1 At1g03470 kinase interacting family protein C.G. S.X.
0.09 3e-2 40 PtpAffx.224993.1.S1_at pmrna43966 cytochrome P450 - 2e-1 At5g24960 CYP71A14 C.G. S.X.
0.03 2e+0 34 PtpAffx.223089.1.S1_at pmrna40906 hypothetical protein - 8e-2 At2g35680 dual specificity protein phosphatase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-2 38 Arabidopsis thaliana At5g60530 836174 late embryogenesis abundant protein-related / LEA protein-related F:molecular_function unknown;P:unknown;C:endomembrane system;MOFBPVA - - - C.G. S.X.
0.03 2e+0 34 Glycine max Gma.6727.1.S1_at Y10493.1 - - 9e-1 At3g26270 CYP71B25 C.G. S.X.
0.03 3e+0 32 Hordeum vulgare Contig20479_at Contig20479 - - 1e+0 At1g22540 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.03 3e+0 34 Oryza sativa Os08g0351400 9636.m02585 - - 3e-3 At3g56810 unknown protein C.G. S.X.
0.04 4e-1 36 Triticum aestivum TaAffx.55926.1.S1_at CA659417 - - 2e+0 At4g17240 unknown protein C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1617871_at CF405710 - - 1e+0 At3g07440 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.14638.1.A1_at BM335183 - - 9e-1 At2g28060 protein kinase-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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