Gene omics information

Query gene ID PtpAffx.218645.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.218645.1.S1_atpmrna34339hypothetical protein-3e-1At1g15350unknown proteinS.X.H.G.
0.2950.5PtpAffx.28818.1.S1_atBU812529--4e+0At4g14305-S.X.H.G.
0.2034.6PtpAffx.224758.1.S1_atpmrna43591nbs-lrr resistance protein-9e-2At4g02910unknown proteinS.X.H.G.
0.1830.8PtpAffx.205845.1.S1_x_atpmrna11575hypothetical protein-5e-7At1g75980-S.X.H.G.
0.1423.5PtpAffx.208855.1.S1_atpmrna17554hypothetical protein-2e-1At1g80910unknown proteinS.X.H.G.
0.0914.6PtpAffx.216363.1.S1_atpmrna31083hypothetical protein-2e-1At5g42957unknown proteinS.X.H.G.
0.0812.9PtpAffx.153410.1.A1_atCV258412--6e-1At4g20030RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.0711.6PtpAffx.223222.1.S1_x_atpmrna41101hypothetical protein-1e+0At1g59700ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)S.X.H.G.
0.0711.6PtpAffx.209606.1.S1_atpmrna18995hypothetical protein-3e-8At4g22090pectate lyase family proteinS.X.H.G.
0.058.3PtpAffx.147944.1.S1_atAJ777676hypothetical protein-3e-1At4g14930acid phosphatase survival protein SurE, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.198.7GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.998.0GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.597.1GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.996.5GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.293.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.092.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.490.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.389.8GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-136PtpAffx.216666.1.S1_atpmrna31603hypothetical protein-9e+0At3g53970proteasome inhibitor-relatedC.G.S.X.
0.064e-134PtpAffx.218392.1.S1_atpmrna33987hypothetical protein-6e+0At3g46910ubiquitin protein ligase bindingC.G.S.X.
0.042e+032PtpAffx.4290.3.A1_atCV245602chorismate synthase /// chorismate synthase-2e-42At1g48850EMB1144 (embryo defective 1144)C.G.S.X.
0.022e+032PtpAffx.4290.1.S1_a_atCV258163chorismate synthase /// chorismate synthase-6e-76At1g48850EMB1144 (embryo defective 1144)C.G.S.X.
0.032e+032Ptp.1640.1.S1_atCX654231chorismate synthase /// chorismate synthase-5e-109At1g48850EMB1144 (embryo defective 1144)C.G.S.X.
0.036e+030PtpAffx.220283.1.S1_atpmrna36653hypothetical protein-6e+0At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
0.026e+030PtpAffx.217991.1.S1_atpmrna33486hypothetical protein-8e+0At1g22680unknown proteinC.G.S.X.
0.036e+030PtpAffx.218036.1.S1_atpmrna33548hypothetical protein-7e+0At5g66580unknown proteinC.G.S.X.
0.056e+030PtpAffx.216283.1.S1_atpmrna30950hypothetical protein-3e+0At3g07760-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-134Arabidopsis thalianaAt1g15350838104unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO---C.G.S.X.
0.032e+032Glycine maxPsAffx.CL499Contig1_atPsAffx.CL499Contig1--8e+0At4g08190Ras-related GTP-binding protein, putativeC.G.S.X.
0.045e-132Hordeum vulgareContig7210_atContig7210--1e+0At5g19190unknown proteinC.G.S.X.
0.041e-136Oryza sativaOs07g06639009635.m04717-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g44450methyltransferaseC.G.S.X.
0.083e-134Triticum aestivumTa.25643.1.S1_atBJ222592--9e-4At1g63160replication factor C 40 kDa, putativeC.G.S.X.
0.045e+028Vitis vinifera1617350_atCB975555hypothetical protein LOC100243953-1e+0At5g22430unknown proteinC.G.S.X.
0.042e+030Zea maysZm.18979.1.A1_atCO535045--2e-2At2g31790UDP-glucoronosyl/UDP-glucosyl transferase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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