Gene omics information

Query gene ID PtpAffx.218468.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.218468.1.S1_atpmrna34094hypothetical protein-0At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)S.X.H.G.
0.5078.6PtpAffx.7721.2.S1_atBU879383--5e-31At5g37370ATSRL1S.X.H.G.
0.4673.7PtpAffx.201300.1.S1_s_atpmrna2582hypothetical protein-1e-34At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4471.9PtpAffx.85760.1.S1_s_atCX181147hypothetical protein-6e-6At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)S.X.H.G.
0.4067.0PtpAffx.53470.1.S1_atBU879364hypothetical protein-6e-56At1g12050fumarylacetoacetase, putativeS.X.H.G.
0.3661.6PtpAffx.21417.1.S1_atCN520322hypothetical protein-3e-135At3g19980ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.892.1GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.088.0GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.4701009PtpAffx.85760.1.S1_s_atCX181147hypothetical protein-6e-6At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.570910PtpAffx.3847.2.A1_atBP935435hypothetical protein-2e-159At1g13320PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)C.G.S.X.
0.420793PtpAffx.6505.1.A1_s_atCV238517hypothetical protein-2e-36At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.420793PtpAffx.6505.1.A1_atCV238517--2e-36At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.600741Ptp.1373.1.S1_s_atCF235734hypothetical protein-0At1g13320PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)C.G.S.X.
0.302e-98361Ptp.3096.1.A1_s_atCV257834hypothetical protein-1e-32At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.291e-965PtpAffx.3847.4.A1_s_atBU820394hypothetical protein-2e-15At1g13320PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)C.G.S.X.
0.011e+036PtpAffx.2568.2.S1_atBU812521hypothetical protein-8e-9At2g22500UCP5 (UNCOUPLING PROTEIN 5)C.G.S.X.
0.021e+036PtpAffx.214952.1.S1_s_atpmrna28884hypothetical protein-2e-7At4g12760unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.680642Arabidopsis thalianaAt3g25800822171PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)one of three genes encoding the protein phosphatase 2A regulatory subunit---C.G.S.X.
0.534e-161569Glycine maxGma.6495.1.S1_atBQ612701--5e-51At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.221e-35151Hordeum vulgareContig2937_s_atContig2937--9e-27At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.422e-126454Oryza sativaOs09g0249700AK069757.1-Protein phosphatase 2A A subunit (Phosphatase 2Aregulatory A subunit)3e-87At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.284e-77289Triticum aestivumTa.1998.2.S1_a_atBJ274484--2e-53At1g25490RCN1 (ROOTS CURL IN NPA)C.G.S.X.
0.462e-122438Vitis vinifera1612881_atBQ795786--4e-35At1g25490RCN1 (ROOTS CURL IN NPA)C.G.S.X.
0.452e-98359Zea maysZm.6045.5.A1_atCK347500--2e-48At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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