Gene omics information

Query gene ID PtpAffx.218451.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5380.5PtpAffx.218451.1.S1_s_atpmrna34073hypothetical protein-2e+0At5g66320zinc finger (GATA type) family proteinS.X.H.G.
0.5078.6PtpAffx.200604.1.S1_x_atpmrna1188hypothetical protein-3e-1At1g10747-S.X.H.G.
0.4471.9PtpAffx.141052.1.A1_atCV234597--2e+0At3g24315AtSec20S.X.H.G.
0.4067.0PtpAffx.223660.1.S1_atpmrna41765hypothetical protein-1e-1At3g44850protein kinase-relatedS.X.H.G.
0.2747.1PtpAffx.221616.1.S1_atpmrna38589hypothetical protein-4e+0At5g25210unknown proteinS.X.H.G.
0.2645.2PtpAffx.218655.1.S1_atpmrna34351hypothetical protein-2e+0At5g58784dehydrodolichyl diphosphate synthaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.599.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
19.399.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
10.999.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.395.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.691.3GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
2.691.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.691.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
1.987.2GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.262e-114410PtpAffx.225509.1.S1_atpmrna44910hypothetical protein-2e-1At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)C.G.S.X.
0.205e-69260PtpAffx.224832.1.S1_x_atpmrna43711hypothetical protein-2e-1At1g72660developmentally regulated GTP-binding protein, putativeC.G.S.X.
0.205e-69260PtpAffx.224832.1.S1_atpmrna43711hypothetical protein-2e-1At1g72660developmentally regulated GTP-binding protein, putativeC.G.S.X.
0.482e-1271PtpAffx.218452.1.S1_s_atpmrna34074hypothetical protein-2e+0At5g61540L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.482e-1271PtpAffx.218452.1.S1_atpmrna34074hypothetical protein-2e+0At5g61540L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.056e-754PtpAffx.224971.1.S1_atpmrna43928hypothetical protein-3e-8At4g08850kinaseC.G.S.X.
0.146e-754PtpAffx.212469.1.S1_atpmrna24430hypothetical protein-4e-1At4g36820unknown proteinC.G.S.X.
0.042e-652PtpAffx.225866.1.S1_x_atpmrna45501hypothetical protein-8e-2At1g34110leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.099e-650PtpAffx.225649.1.S1_s_atpmrna45139hypothetical protein-6e-2At3g56470F-box family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+032Arabidopsis thalianaAt5g66320836764zinc finger (GATA type) family proteinEncodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.---C.G.S.X.
0.061e-136Glycine maxGmaAffx.90059.1.S1_atCF805784--2e-2At2g19330leucine-rich repeat family proteinC.G.S.X.
0.043e+030Hordeum vulgareHV04H12r_atHV04H12r--4e+0At5g16650DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.037e-134Oryza sativaOs12g0555400AK061098.1-Raffinose synthase protein1e-1At1g48550vacuolar protein sorting-associated protein 26 family protein / VPS26 family proteinC.G.S.X.
0.072e+128Triticum aestivumTaAffx.93343.1.A1_atBJ216150--2e+0At1g61810BGLU45 (BETA-GLUCOSIDASE 45)C.G.S.X.
0.064e-132Vitis vinifera1616573_atCD800557similar to Callose synthase 3-5e-14At1g05570CALS1 (CALLOSE SYNTHASE 1)C.G.S.X.
0.043e+030Zea maysZmAffx.1060.1.A1_atAI881420--1e-9At1g51570C2 domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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