Gene omics information

Query gene ID PtpAffx.218440.1.S1_at
Gene name cytochrome P450
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5380.5PtpAffx.218440.1.S1_atpmrna34052cytochrome P450-4e-2At5g36110CYP716A1S.X.H.G.
0.4268.6PtpAffx.207447.1.S1_s_atpmrna14787hypothetical protein-6e-23At5g10530lectin protein kinase, putativeS.X.H.G.
0.2747.1PtpAffx.249.648.S1_atDN491954hypothetical protein-2e-23At4g34640SQS1 (SQUALENE SYNTHASE 1)S.X.H.G.
0.2747.1PtpAffx.224787.1.S1_atpmrna43636hypothetical protein-2e-15At1g16670protein kinase family proteinS.X.H.G.
0.2645.2PtpAffx.212041.1.S1_atpmrna23634hypothetical protein-8e-7At5g44070CAD1 (CADMIUM SENSITIVE 1)S.X.H.G.
0.2340.5PtpAffx.206137.1.S1_atpmrna12171hypothetical protein-5e-49At3g57630exostosin family proteinS.X.H.G.
0.2238.3PtpAffx.212573.1.S1_atpmrna24632hypothetical protein-2e-40At5g53050hydrolase, alpha/beta fold family proteinS.X.H.G.
0.1729.1PtpAffx.24923.1.A1_atCV241357hypothetical protein-5e-28At1g67060unknown proteinS.X.H.G.
0.1219.6PtpAffx.215508.1.S1_s_atpmrna29745hypothetical protein-4e-6At4g04960lectin protein kinase, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.199.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
10.299.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.594.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.389.8GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.886.4GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
1.785.5GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8501459PtpAffx.210147.1.S1_atpmrna19991cytochrome P450-1e-2At5g36110CYP716A1C.G.S.X.
0.541e-172607PtpAffx.223595.1.S1_s_atpmrna41658cytochrome P450 /// cytochrome P450-1e+0At2g28400unknown proteinC.G.S.X.
0.123e-25117PtpAffx.4977.1.A1_atCV267024cytochrome P450-3e+0At5g22990zinc finger (C2H2 type) family proteinC.G.S.X.
0.071e-965PtpAffx.225317.1.S1_atpmrna44580cytochrome P450-2e-4At5g36110CYP716A1C.G.S.X.
0.044e-654PtpAffx.224960.1.S1_atpmrna43902cytochrome P450-2e-4At2g32440KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2)C.G.S.X.
0.053e-448PtpAffx.225095.1.S1_atpmrna44193hypothetical protein-5e-5At5g36110CYP716A1C.G.S.X.
0.053e-448PtpAffx.225095.1.S1_s_atpmrna44193cytochrome P450 /// hypothetical protein-5e-5At5g36110CYP716A1C.G.S.X.
0.026e-240PtpAffx.225097.1.S1_atpmrna44195cytochrome P450-5e-5At5g36110CYP716A1C.G.S.X.
0.026e-240PtpAffx.225096.1.S1_s_atpmrna44194cytochrome P450 /// hypothetical protein-5e-5At5g36110CYP716A1C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-240Arabidopsis thalianaAt5g36110833607CYP716A1member of CYP716A---C.G.S.X.
0.056e-240Glycine maxGmaAffx.41338.1.A1_atBU550133--2e+0At2g36881unknown proteinC.G.S.X.
0.023e-136Hordeum vulgareHF22K12r_atHF22K12r--5e+0At5g23680sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.026e+034Oryza sativaOsAffx.29924.1.S1_at---0C.G.S.X.
0.022e-138Triticum aestivumTa.18497.1.S1_atCA638066--8e-1At5g16940carbon-sulfur lyaseC.G.S.X.
0.023e-342Vitis vinifera1610182_atBQ797806hypothetical protein LOC100251813-4e-11At5g36130cytochrome P450 familyC.G.S.X.
0.023e-136Zea maysZmAffx.428.1.A1_atAI676868hypothetical protein LOC100193500-2e-1At3g18630uracil DNA glycosylase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage