Gene omics information

Query gene ID PtpAffx.218251.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.218251.1.S1_atpmrna33803hypothetical protein-2e+1At4g05050UBQ11 (UBIQUITIN 11)S.X.H.G.
0.5078.6PtpAffx.218048.1.S1_atpmrna33565hypothetical protein-2e+0At5g28450chlorophyll A-B binding protein, chloroplast, putative / LHCI type II CAB, putativeS.X.H.G.
0.4471.9PtpAffx.203993.1.S1_atpmrna7880hypothetical protein-3e+0At5g64240AtMC3 (metacaspase 3)S.X.H.G.
0.3153.7PtpAffx.119247.1.A1_atDN486218--4e+0At5g50665unknown proteinS.X.H.G.
0.2950.5PtpAffx.211622.1.S1_atpmrna22777--9e-6At1g35580CINV1 (cytosolic invertase 1)S.X.H.G.
0.2543.6PtpAffx.210088.1.S1_atpmrna19871hypothetical protein-1e+0At3g09600myb family transcription factorS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.799.9GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
15.999.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.295.6GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.794.7GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.188.6GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.785.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-446PtpAffx.221906.1.S1_atpmrna39018hypothetical protein-5e+0At4g14276-C.G.S.X.
0.022e-240PtpAffx.219099.1.S1_atpmrna34918--9e-1At2g28671unknown proteinC.G.S.X.
0.079e-238PtpAffx.219625.1.S1_atpmrna35587hypothetical protein-2e+1At5g63230-C.G.S.X.
0.021e+034PtpAffx.221929.1.S1_atpmrna39048hypothetical protein-9e+0At3g14880-C.G.S.X.
0.041e+034PtpAffx.220502.1.S1_atpmrna36895hypothetical protein-4e+0At5g51940NRPB6AC.G.S.X.
0.021e+034PtpAffx.219258.1.S1_atpmrna35124--3e+0At1g02430ATARFD1B (ADP-ribosylation factor D1B)C.G.S.X.
0.021e+034PtpAffx.218150.1.S1_atpmrna33681hypothetical protein-1e+1At5g03380heavy-metal-associated domain-containing proteinC.G.S.X.
0.031e+034PtpAffx.109748.1.S1_atCK106057hypothetical protein-3e-13At1g53570MAP3KAC.G.S.X.
0.016e+032PtpAffx.221378.1.S1_atpmrna38249hypothetical protein-9e-1At5g18040unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+130Arabidopsis thalianaAt4g05050825847UBQ11 (UBIQUITIN 11)polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene.---C.G.S.X.
0.044e-136Glycine maxPsAffx.psZG003xN03f_s_atPsAffx.psZG003xN03f--3e-2At1g78995unknown proteinC.G.S.X.
0.042e+032Hordeum vulgarerbags1n09_s_atrbags1n09--5e-1At1g31812ACBP6 (acyl-CoA-binding protein 6)C.G.S.X.
0.031e-138Oryza sativaOs05g01840009633.m00823-Hypothetical protein1e-1At3g45910unknown proteinC.G.S.X.
0.043e-136Triticum aestivumTa.8834.2.S1_x_atCA637860--4e+0At5g62950catalytic/ nucleotide bindingC.G.S.X.
0.031e+032Vitis vinifera1622632_atCB003772--1e+0At4g16820lipase class 3 family proteinC.G.S.X.
0.034e-134Zea maysZm.19048.1.A1_atAI857148carbohydrate transporter/ sugar porter-1e+0At4g26080ABI1 (ABA INSENSITIVE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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