Gene omics information

Query gene ID PtpAffx.218224.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.218224.1.S1_x_atpmrna33774hypothetical protein-2e+0At3g51325zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4067.0PtpAffx.249.670.A1_atBP930255--7e-45At4g05050UBQ11 (UBIQUITIN 11)S.X.H.G.
0.4067.0PtpAffx.220310.1.S1_atpmrna36680hypothetical protein-4e-1At4g29850unknown proteinS.X.H.G.
0.2645.2PtpAffx.217755.1.S1_atpmrna33144hypothetical protein-6e+0At2g06530VPS2.1S.X.H.G.
0.2238.3PtpAffx.215118.1.S1_atpmrna29119cytochrome P450-1e+0At4g27360dynein light chain, putativeS.X.H.G.
0.0812.9PtpAffx.205970.1.S1_atpmrna11840hypothetical protein-8e-1At5g09750HEC3 (HECATE 3)S.X.H.G.
0.0711.6PtpAffx.216556.1.S1_atpmrna31403hypothetical protein-8e+0At1g68000ATPIS1 (PHOSPHATIDYLINOSITOL SYNTHASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.397.7GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.295.6GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.892.1GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.389.8GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.389.8GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.188.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
2.188.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.088.0GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.611e-35149PtpAffx.212641.1.S1_atpmrna24738hypothetical protein-3e+0At3g51325zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.235e-23107PtpAffx.17681.1.A1_atCV276890--2e+0At2g41225unknown proteinC.G.S.X.
0.365e-1787PtpAffx.221668.1.S1_atpmrna38668hypothetical protein-6e+0At3g26470-C.G.S.X.
0.197e-1373PtpAffx.213580.1.S1_atpmrna26529hypothetical protein-3e-1At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)C.G.S.X.
0.111e-1169PtpAffx.11704.1.A1_atCV256076--4e+0At4g26840SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)C.G.S.X.
0.102e-1065PtpAffx.219362.1.S1_atpmrna35260hypothetical protein-5e+0At3g51325zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.094e-857PtpAffx.215060.1.S1_atpmrna29019hypothetical protein-6e-2At4g09270unknown proteinC.G.S.X.
0.084e-857PtpAffx.202774.1.S1_atpmrna5519hypothetical protein-1e+0At1g03870FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)C.G.S.X.
0.052e-756PtpAffx.26267.1.S1_atCK095584--4e-1At4g10920KELPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e+032Arabidopsis thalianaAt3g513252745959zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PMOF---C.G.S.X.
0.046e-134Glycine maxHgAffx.11100.1.S1_atCB824350--5e+0At3g49796unknown proteinC.G.S.X.
0.053e+030Hordeum vulgareHA10A12u_x_atHA10A12u--4e-27At2g34420LHB1B2C.G.S.X.
0.043e+032Oryza sativaOsAffx.16210.1.S1_at---0C.G.S.X.
0.067e+030Triticum aestivumTaAffx.78710.1.S1_atCA721414--2e-1At3g54363unknown proteinC.G.S.X.
0.042e+030Vitis vinifera1613994_atBQ794302hypothetical protein LOC100260766-6e-21At2g31090unknown proteinC.G.S.X.
0.043e+030Zea maysZm.4634.1.A1_atAI737447--4e+0At5g43260chaperone protein dnaJ-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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