Gene omics information

Query gene ID PtpAffx.217882.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5380.5PtpAffx.217882.1.S1_atpmrna33326hypothetical protein-9e+0At2g42540COR15A (COLD-REGULATED 15A)S.X.H.G.
0.046.9PtpAffx.214697.1.S1_s_atpmrna28515hypothetical protein-3e+0Atmg01230-S.X.H.G.
0.035.2PtpAffx.220086.1.S1_atpmrna36400hypothetical protein-1e-3At3g29075glycine-rich proteinS.X.H.G.
0.023.6PtpAffx.212632.1.S1_atpmrna24727hypothetical protein-2e+0At4g18510CLE2 (CLAVATA3/ESR-RELATED)S.X.H.G.
0.012.2Ptp.1694.2.S1_atCV271391hypothetical protein-3e-16At5g60160aspartyl aminopeptidase, putativeS.X.H.G.
0.012.2PtpAffx.210043.1.S1_atpmrna19784hypothetical protein-2e-5At2g36690oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.998.9GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.398.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.997.4GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.697.2GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.096.6GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.395.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
3.894.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.092.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.261e-20101PtpAffx.223492.1.S1_atpmrna41523hypothetical protein-6e-1At2g27810xanthine/uracil permease family proteinC.G.S.X.
0.052e-757PtpAffx.215102.1.S1_atpmrna29081hypothetical protein-9e+0At2g165303-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family proteinC.G.S.X.
0.018e-136PtpAffx.223036.1.S1_atpmrna40823hypothetical protein-2e+1At3g57540remorin family proteinC.G.S.X.
0.013e+034PtpAffx.222034.1.S1_atpmrna39230hypothetical protein-3e+1At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.023e+034PtpAffx.220170.1.S1_atpmrna36524hypothetical protein-2e+1At3g22820allergen-relatedC.G.S.X.
0.013e+034PtpAffx.219879.1.S1_atpmrna36035hypothetical protein-3e+0At5g47640NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)C.G.S.X.
0.013e+034PtpAffx.219487.1.S1_atpmrna35425peptide exporter, ABC transporter family protein-4e+0At4g31760peroxidase, putativeC.G.S.X.
0.033e+034PtpAffx.217837.1.S1_atpmrna33260hypothetical protein-6e+0At3g50685unknown proteinC.G.S.X.
0.023e+034PtpAffx.216758.1.S1_atpmrna31744hypothetical protein-1e-1At4g18830OFP5 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 5)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e+032Arabidopsis thalianaAt2g42540818854COR15A (COLD-REGULATED 15A)A cold-regulated gene whose product is targeted to the chloroplast and constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope.---C.G.S.X.
0.032e-138Glycine maxPsAffx.C233000007_s_atPsAffx.C233000007--3e-1At4g35900FDC.G.S.X.
0.033e-136Hordeum vulgareEBro08_SQ005_I06_atEBro08_SQ005_I06--4e+0At5g59440ZEU1 (ZEUS1)C.G.S.X.
0.037e-240Oryza sativaOs07g01928009635.m00913-AAA ATPase, central region domain containingprotein5e-3At4g21620glycine-rich proteinC.G.S.X.
0.026e-136Triticum aestivumTa.26025.1.A1_atCD454728--8e-2At2g33510protein bindingC.G.S.X.
0.023e+032Vitis vinifera1611145_atCF513038hypothetical protein LOC100263525-4e-9At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.032e-136Zea maysZm.2538.1.A1_atBM336091hypothetical protein LOC100278766-4e+0At4g01935unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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