Gene omics information

Query gene ID PtpAffx.217592.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8897.7PtpAffx.217592.1.S1_atpmrna32924hypothetical protein-7e-6At5g57560TCH4 (Touch 4)S.X.H.G.
0.5683.9Ptp.2653.1.S1_a_atCV261695hypothetical protein-1e-9At3g12490cysteine protease inhibitor, putative / cystatin, putativeS.X.H.G.
0.5178.9PtpAffx.211748.1.S1_s_atpmrna23020hypothetical protein-4e-1At3g18960transcriptional factor B3 family proteinS.X.H.G.
0.4975.7Ptp.3520.1.A1_s_atCV258205acyl:coa ligase-4e-20At3g48990AMP-dependent synthetase and ligase family proteinS.X.H.G.
0.4975.7PtpAffx.5825.1.A1_atCV270995hypothetical protein-2e-12At1g66150TMK1 (TRANSMEMBRANE KINASE 1)S.X.H.G.
0.4774.6PtpAffx.205458.1.S1_atpmrna10789hypothetical protein-1e-5At1g33080MATE efflux family proteinS.X.H.G.
0.4369.7PtpAffx.219959.1.S1_atpmrna36139hypothetical protein-3e-6At3g14360lipase class 3 family proteinS.X.H.G.
0.4268.6PtpAffx.74066.1.S1_atCN522685--9e-1At1g16080unknown proteinS.X.H.G.
0.4268.6PtpAffx.220998.1.S1_atpmrna37520hypothetical protein-9e-1At2g16940RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4167.7PtpAffx.217312.1.S1_atpmrna32518hypothetical protein-8e-32At1g05055GTF2H2 (GENERAL TRANSCRIPTION FACTOR IIH 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.699.6GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
16.099.6GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
11.899.2GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
5.296.8GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
5.096.6GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
4.596.1GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.367e-53208PtpAffx.84718.1.S1_s_atAJ773668hypothetical protein-4e-25At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.367e-53208PtpAffx.84718.1.S1_atAJ773668hypothetical protein-4e-25At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.262e-37157Ptp.7376.1.S1_a_atCV233936hypothetical protein-6e-7At4g30270MERI5B (meristem-5)C.G.S.X.
0.331e-26121Ptp.3948.1.S1_atDN488621hypothetical protein-1e-38At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.171e-23111PtpAffx.214395.1.S1_atpmrna28007hypothetical protein-2e-24At4g30270MERI5B (meristem-5)C.G.S.X.
0.235e-1789Ptp.6729.1.S1_atBU884753hypothetical protein-2e-13At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.387e-1375PtpAffx.214394.1.S1_atpmrna28006hypothetical protein-8e-18At4g30270MERI5B (meristem-5)C.G.S.X.
0.133e-1273Ptp.4442.1.S1_atCV226738hypothetical protein-2e-31At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.111e-1171PtpAffx.5903.1.A1_a_atCN519614hypothetical protein-3e-31At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.267e-652Arabidopsis thalianaAt5g57560835860TCH4 (Touch 4)Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli---C.G.S.X.
0.341e-35151Glycine maxGma.4027.1.S1_atBQ629007--3e-12At4g30270MERI5B (meristem-5)C.G.S.X.
0.038e-134Hordeum vulgareContig2673_atContig2673--1e-17At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.068e-136Oryza sativaOs08g0240500CB000335-Glycoside hydrolase, family 16 protein1e+0At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.054e-136Triticum aestivumTa.6026.2.S1_a_atBJ258455--1e-3At3g20480tetraacyldisaccharide 4'-kinase family proteinC.G.S.X.
0.292e-1581Vitis vinifera1610073_atCF206157.1hypothetical protein LOC100256457-4e-10At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.037e-134Zea maysZm.9765.1.A1_atBM338217--4e+0At5g17310UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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