Gene omics information

Query gene ID PtpAffx.217511.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.217511.1.S1_atpmrna32803hypothetical protein-9e-7At4g02940oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.6086.0PtpAffx.201372.1.S1_x_atpmrna2709hypothetical protein-1e+0At5g39950ATTRX2 (THIOREDOXIN 2)S.X.H.G.
0.2034.6PtpAffx.139172.1.S1_atBP922379hypothetical protein-2e-5At3g59690IQD13 (IQ-domain 13)S.X.H.G.
0.2034.6PtpAffx.209390.1.S1_atpmrna18598hypothetical protein-9e-5At3g52270ATP binding / RNA polymerase II transcription factorS.X.H.G.
0.1932.7Ptp.2937.1.S1_s_atCV225687--5e-4At5g40370glutaredoxin, putativeS.X.H.G.
0.1321.6Ptp.6212.1.S1_s_atCX174523hypothetical protein-2e+1At5g02780In2-1 protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.698.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.096.6GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.996.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.996.5GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.696.2GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.995.1GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.188.6GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-446PtpAffx.14777.1.S1_atCA823578hypothetical protein-4e-1At1g55510BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT)C.G.S.X.
0.037e-238PtpAffx.857.2.S1_atCV257491hypothetical protein-2e-3At1g15380lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.023e-136Ptp.7634.1.S1_atDN488365--1e-32At2g36890RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)C.G.S.X.
0.041e+034PtpAffx.216294.1.S1_atpmrna30978hypothetical protein-3e-62At5g56110ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)C.G.S.X.
0.041e+034PtpAffx.201487.1.S1_atpmrna2925hypothetical protein-4e-67At5g56110ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)C.G.S.X.
0.011e+034PtpAffx.200940.1.S1_atpmrna1850hypothetical protein-1e-35At5g15020SNL2 (SIN3-LIKE 2)C.G.S.X.
0.011e+034PtpAffx.136820.1.S1_atCV275296hypothetical protein-6e-24At1g71010phosphatidylinositol-4-phosphate 5-kinase family proteinC.G.S.X.
0.011e+034PtpAffx.136820.1.S1_a_atCV275296hypothetical protein-6e-24At1g71010phosphatidylinositol-4-phosphate 5-kinase family proteinC.G.S.X.
0.031e+034Ptp.7108.1.S1_atDN488402--2e+0At1g24090RNase H domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.139e-754Arabidopsis thalianaAt4g02940828132oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFB---C.G.S.X.
0.122e-1479Glycine maxGma.13663.1.S1_atBI969260--2e-10At4g02940oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.054e-134Hordeum vulgareHS06A18u_atHS06A18u--8e+0At5g26080proline-rich family proteinC.G.S.X.
0.026e+032Oryza sativaOsAffx.28970.2.S1_at---0C.G.S.X.
0.118e-134Triticum aestivumTaAffx.31215.1.S1_atCA618463--1e-3At4g02940oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.049e-132Vitis vinifera1614827_atCD801620--9e-1At3g58410meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.051e+032Zea maysZm.6398.2.A1_atAI881528--3e+0At2g40750WRKY54C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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