Gene omics information

Query gene ID PtpAffx.216786.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.216786.1.S1_atpmrna31785hypothetical protein-3e-8At5g06839bZIP family transcription factorS.X.H.G.
0.8096.0Ptp.8132.1.A1_atDN503748hypothetical protein-6e-6At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)S.X.H.G.
0.6791.1PtpAffx.213306.1.S1_atpmrna26027hypothetical protein-8e-18At5g06839bZIP family transcription factorS.X.H.G.
0.6791.1PtpAffx.207445.1.S1_atpmrna14784hypothetical protein-3e-1At2g05940protein kinase, putativeS.X.H.G.
0.5784.2PtpAffx.26121.1.S1_atAJ775744--1e-3At1g18390ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseS.X.H.G.
0.5078.6PtpAffx.21973.1.A1_atCV257905hypothetical protein-3e-8At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.398.2GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.996.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.095.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.840969PtpAffx.213306.1.S1_atpmrna26027hypothetical protein-8e-18At5g06839bZIP family transcription factorC.G.S.X.
0.021e-552PtpAffx.222479.1.S1_x_atpmrna39930hypothetical protein-5e-8At1g08320bZIP family transcription factorC.G.S.X.
0.021e-552PtpAffx.222479.1.S1_atpmrna39930hypothetical protein-5e-8At1g08320bZIP family transcription factorC.G.S.X.
0.063e-344PtpAffx.204392.1.S1_atpmrna8622hypothetical protein-3e-12At1g08320bZIP family transcription factorC.G.S.X.
0.114e-240PtpAffx.77528.2.A1_atCV244458hypothetical protein-1e-41At5g06950AHBP-1BC.G.S.X.
0.022e-138PtpAffx.212393.1.S1_atpmrna24283hypothetical protein-3e-49At1g34320unknown proteinC.G.S.X.
0.022e-138PtpAffx.212393.1.S1_s_atpmrna24283hypothetical protein-3e-49At1g34320unknown proteinC.G.S.X.
0.022e-138PtpAffx.1351.2.S1_s_atCF229018hypothetical protein-4e-88At2g25430epsin N-terminal homology (ENTH) domain-containing proteinC.G.S.X.
0.096e-136PtpAffx.143760.1.S1_atBU872292hypothetical protein-4e-22At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.273e-859Arabidopsis thalianaAt5g06839830575bZIP family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF---C.G.S.X.
0.152e-1687Glycine maxGmaAffx.15268.1.S1_atBU760812--6e-5At5g06839bZIP family transcription factorC.G.S.X.
0.084e-342Hordeum vulgareContig5909_atContig5909--4e-12At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.142e-861Oryza sativaOs02g01949009630.m00931-BZIP transcription factor-like protein1e-4At5g06950AHBP-1BC.G.S.X.
0.058e-342Triticum aestivumTa.808.1.S1_atBJ217235HBP-1b-2e-5At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.053e-238Vitis vinifera1609185_atCB972681similar to TGA-type basic leucine zipper protein TGA2.2-2e-6At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.085e-238Zea maysZm.19119.1.A1_atCO521073hypothetical protein LOC100274089-1e-11At1g68640PAN (PERIANTHIA)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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