Gene omics information

Query gene ID PtpAffx.216450.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.216450.1.S1_atpmrna31230hypothetical protein-2e-4Atcg00500-S.X.H.G.
0.5784.2PtpAffx.6054.1.S1_atCA821641--7e-9At2g12905unknown proteinS.X.H.G.
0.4471.9PtpAffx.27285.1.A1_s_atCA923948hypothetical protein-9e-58At1g80670transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.2950.5Ptp.6512.1.S1_s_atCK112728--2e-92Atcg00790-S.X.H.G.
0.2950.5PtpAffx.216450.1.S1_s_atpmrna31230hypothetical protein-2e-4Atcg00500-S.X.H.G.
0.2238.3PtpAffx.28247.1.A1_atCV243278hypothetical protein-2e-65At3g23940dehydratase familyS.X.H.G.
0.1525.3PtpAffx.121047.1.A1_atCV256059hypothetical protein-2e-15At1g03687-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.095.3GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.393.7GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.791.8GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.691.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.289.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.188.6GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9701061PtpAffx.216450.1.S1_s_atpmrna31230hypothetical protein-2e-4Atcg00500-C.G.S.X.
0.570680PtpAffx.6054.1.S1_atCA821641--7e-9At2g12905unknown proteinC.G.S.X.
0.067e-26119PtpAffx.216075.1.S1_atpmrna30638--4e-42Atcg00500-C.G.S.X.
0.026e-240Ptp.2799.1.S1_atBU874348hypothetical protein-3e-20At5g47890NADH-ubiquinone oxidoreductase B8 subunit, putativeC.G.S.X.
0.022e-138Ptp.1726.1.S1_a_atCK093278hypothetical protein /// f-box family protein-8e-15At5g43190F-box family protein (FBX6)C.G.S.X.
0.029e-136PtpAffx.5022.1.A1_atCV239537--3e-8At3g46450SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinC.G.S.X.
0.029e-136PtpAffx.205033.1.S1_atpmrna9971hypothetical protein-1e-104Atcg00280-C.G.S.X.
0.039e-136PtpAffx.106209.1.A1_atDN493000--3e-1At4g28775unknown proteinC.G.S.X.
0.023e+034PtpAffx.21140.1.S1_atDN495906hypothetical protein-7e-1At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-448Arabidopsis thalianaAtcg00500--Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.---C.G.S.X.
0.142e-51204Glycine maxGmaAffx.2207.1.S1_atCD416658--2e-78Atcg00360-C.G.S.X.
0.055e-342Hordeum vulgareHVSMEb0007O01f_atHVSMEb0007O01f--1e-12Atcg00280-C.G.S.X.
0.137e-36153Oryza sativaOs10g0357200X15901.1--4e-108Atcg00360-C.G.S.X.
0.161e-42174Triticum aestivumTaAffx.27824.1.S1_atCA669852--3e+0At5g08400unknown proteinC.G.S.X.
0.169e-59226Vitis vinifera1612048_atCD798427--0Atcg00380-C.G.S.X.
0.132e-29129Zea maysZmAffx.1456.1.S1_at11990232-23Photosystem I assembly protein ycf3-2e-116Atcg00360-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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