Gene omics information

Query gene ID PtpAffx.214837.1.S1_at
Gene name white-brown-complex ABC transporter family
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7794.9PtpAffx.214837.1.S1_atpmrna28728white-brown-complex ABC transporter family-4e-3At4g27420ABC transporter family proteinS.X.H.G.
0.5480.8PtpAffx.203080.1.S1_atpmrna6095hypothetical protein-3e-24At3g51470protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.4774.6Ptp.1906.1.A1_s_atCK092074hypothetical protein-7e-2At2g24070unknown proteinS.X.H.G.
0.4067.0PtpAffx.131325.1.S1_s_atCA824597hypothetical protein-1e-3At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)S.X.H.G.
0.4067.0PtpAffx.202007.1.S1_atpmrna4000amino acid transporter-2e-1At1g52040MBP1 (MYROSINASE-BINDING PROTEIN 1)S.X.H.G.
0.4067.0PtpAffx.21546.1.S1_atDN494511hypothetical protein-4e+0At4g01460basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.3863.7PtpAffx.63071.1.A1_atCV255719--1e-1At4g19200proline-rich family proteinS.X.H.G.
0.3863.7PtpAffx.14861.1.S1_atCV238473--4e-1At3g29070protein transmembrane transporterS.X.H.G.
0.3357.5PtpAffx.204982.1.S1_s_atpmrna9866hypothetical protein-3e-12At5g59790unknown proteinS.X.H.G.
0.3255.2PtpAffx.7814.2.A1_atCV281562hypothetical protein-7e-12At5g47180vesicle-associated membrane family protein / VAMP family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.199.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
16.099.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
9.498.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
9.098.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.996.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.886.4GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.076.2GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.076.2GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8902294PtpAffx.209983.1.S1_atpmrna19695white-brown-complex ABC transporter family-5e-18At4g27420ABC transporter family proteinC.G.S.X.
0.256e-163575PtpAffx.9729.1.A1_atDN492033white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-3e-1At4g11640ATSR (ARABIDOPSIS THALIANA SERINE RACEMASE)C.G.S.X.
0.029e-240PtpAffx.212863.1.S1_atpmrna25169hypothetical protein-3e-8At5g63420emb2746 (embryo defective 2746)C.G.S.X.
0.053e-138PtpAffx.221304.1.S1_atpmrna38091white-brown-complex ABC transporter family-1e-6At1g71960ABC transporter family proteinC.G.S.X.
0.013e-138PtpAffx.214812.1.S1_atpmrna28669hypothetical protein-1e-111At1g53165ATMAP4K ALPHA1C.G.S.X.
0.053e-138PtpAffx.212377.1.S1_x_atpmrna24254white-brown-complex ABC transporter family-4e-6At1g71960ABC transporter family proteinC.G.S.X.
0.053e-138PtpAffx.212377.1.S1_atpmrna24254white-brown-complex ABC transporter family-4e-6At1g71960ABC transporter family proteinC.G.S.X.
0.053e-138PtpAffx.212377.1.S1_s_atpmrna24254white-brown-complex ABC transporter family-4e-6At1g71960ABC transporter family proteinC.G.S.X.
0.053e-138PtpAffx.208987.1.S1_atpmrna17808white-brown-complex ABC transporter family-3e-19At3g25620ABC transporter family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-344Arabidopsis thalianaAt4g27420828850ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMFAPV---C.G.S.X.
0.025e+034Glycine maxHgAffx.16547.1.S1_atCB279809--3e+0Atmg00140-C.G.S.X.
0.012e+034Hordeum vulgareContig4276_s_atContig4276--7e-3At3g18430calcium-binding EF hand family proteinC.G.S.X.
0.011e-140Oryza sativaOs02g0735800AK065002.1-Protein prenyltransferase domain containingprotein1e+0At3g13880pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.024e+034Triticum aestivumTaAffx.55723.1.A1_atCA662150--4e+0At4g13095LCR37 (Low-molecular-weight cysteine-rich 37)C.G.S.X.
0.031e+034Vitis vinifera1617025_atCF513033hypothetical protein LOC100247745-2e-23At1g31770ABC transporter family proteinC.G.S.X.
0.014e-136Zea maysZm.4940.2.S1_a_atAI979640--2e-21At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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