Gene omics information

Query gene ID PtpAffx.214394.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.214394.1.S1_atpmrna28006hypothetical protein-8e-18At4g30270MERI5B (meristem-5)S.X.H.G.
0.0914.6PtpAffx.1601.3.S1_x_atCV225715hypothetical protein-1e-23At3g09390MT2A (METALLOTHIONEIN 2A)S.X.H.G.
0.058.3PtpAffx.19737.1.A1_atBP932437hypothetical protein-1e-3At1g49820ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE)S.X.H.G.
0.058.3PtpAffx.121350.1.S1_atCV243433serine/threonine protein kinase 4, CTR4-4e-1At2g15130plant basic secretory protein (BSP) family proteinS.X.H.G.
0.035.2PtpAffx.201372.1.S1_x_atpmrna2709hypothetical protein-1e+0At5g39950ATTRX2 (THIOREDOXIN 2)S.X.H.G.
0.035.2PtpAffx.221758.1.S1_s_atpmrna38803hypothetical protein-3e+0At5g08505-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.498.8GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
7.998.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
7.398.2GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.697.2GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.497.0GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.896.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.195.5GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.995.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.482e-59230Ptp.3948.1.S1_atDN488621hypothetical protein-1e-38At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.479e-43174Ptp.7376.1.S1_a_atCV233936hypothetical protein-6e-7At4g30270MERI5B (meristem-5)C.G.S.X.
0.481e-38161PtpAffx.214395.1.S1_atpmrna28007hypothetical protein-2e-24At4g30270MERI5B (meristem-5)C.G.S.X.
0.543e-36153PtpAffx.84718.1.S1_s_atAJ773668hypothetical protein-4e-25At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.543e-36153PtpAffx.84718.1.S1_atAJ773668hypothetical protein-4e-25At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.123e-24113PtpAffx.56651.2.S1_atBU834782hypothetical protein-1e-4At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.167e-1685PtpAffx.56651.1.A1_atCV236471hypothetical protein-8e-12At5g57560TCH4 (Touch 4)C.G.S.X.
0.307e-1685Ptp.6729.1.S1_atBU884753hypothetical protein-2e-13At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.193e-1583Ptp.4442.1.S1_atCV226738hypothetical protein-2e-31At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.438e-1891Arabidopsis thalianaAt4g30270829150MERI5B (meristem-5)encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response.---C.G.S.X.
0.493e-36153Glycine maxGma.4027.1.S1_atBQ629007--3e-12At4g30270MERI5B (meristem-5)C.G.S.X.
0.105e-857Hordeum vulgareContig2670_x_atContig2670--5e-20At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.032e-138Oryza sativaOs.11465.1.S1_at---0C.G.S.X.
0.054e-446Triticum aestivumTaAffx.15847.3.S1_atBQ802374--5e+0At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.509e-24109Vitis vinifera1618848_atCB977336hypothetical protein LOC100261550-6e-10At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.031e+130Zea maysZmAffx.543.1.S1_atAI712085--3e+0At4g03510RMA1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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