Gene omics information

Query gene ID PtpAffx.214190.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.214190.1.S1_atpmrna27608hypothetical protein-1e+1At5g03330OTU-like cysteine protease family proteinS.X.H.G.
0.4471.9PtpAffx.46493.2.S1_atBP936198--1e-9At4g25700BETA-OHASE 1 (BETA-HYDROXYLASE 1)S.X.H.G.
0.4369.7PtpAffx.219740.1.S1_atpmrna35767AP2 domain-containing transcription factor-2e-1At1g18790RWP-RK domain-containing proteinS.X.H.G.
0.3153.7Ptp.2724.1.S1_s_atDN503650hypothetical protein-2e+0At3g06455splicing factor-relatedS.X.H.G.
0.1830.8PtpAffx.202245.1.S1_atpmrna4500hypothetical protein-3e-15At2g46270GBF3 (G-BOX BINDING FACTOR 3)S.X.H.G.
0.1729.1PtpAffx.215243.1.S1_atpmrna29321hypothetical protein-7e-52At4g03410peroxisomal membrane protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.399.8GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
19.299.7GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
16.899.6GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
9.398.8GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
8.098.4GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.293.5GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.590.9GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.188.6GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.178.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.872.0GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034PtpAffx.209571.1.S1_atpmrna18946--2e-13At4g21890unknown proteinC.G.S.X.
0.021e+034PtpAffx.129173.1.S1_atCK097709hypothetical protein-7e-1At3g23230ethylene-responsive factor, putativeC.G.S.X.
0.045e+032PtpAffx.83574.1.S1_atCN522119--2e-1At3g44960unknown proteinC.G.S.X.
0.035e+032PtpAffx.606.7.S1_atBU830183hypothetical protein-8e-6At1g70640octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.025e+032PtpAffx.35486.1.S1_atDN488822hypothetical protein-6e-1At3g48675unknown proteinC.G.S.X.
0.025e+032PtpAffx.224522.1.S1_atpmrna43141--2e-4At2g38290ATAMT2 (AMMONIUM TRANSPORTER 2)C.G.S.X.
0.035e+032PtpAffx.216204.1.S1_atpmrna30843hypothetical protein-1e-9At3g52155-C.G.S.X.
0.015e+032PtpAffx.214216.1.S1_atpmrna27661hypothetical protein-3e-8At1g15750TPL (TOPLESS)C.G.S.X.
0.045e+032PtpAffx.211528.1.S1_atpmrna22593hypothetical protein-9e-1At5g62550unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+130Arabidopsis thalianaAt5g03330831875OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MOPFVB---C.G.S.X.
0.045e+032Glycine maxGma.6377.1.S1_atCD400886--2e-1At1g52825unknown proteinC.G.S.X.
0.041e-136Hordeum vulgareContig14136_atContig14136--7e-15At1g71010phosphatidylinositol-4-phosphate 5-kinase family proteinC.G.S.X.
0.041e-138Oryza sativaOs.54758.1.S1_at---0C.G.S.X.
0.046e-238Triticum aestivumTaAffx.27366.1.S1_atCA677793--1e+0Atmg00650-C.G.S.X.
0.041e+032Vitis vinifera1609808_atCB349851hypothetical protein LOC100250305-8e-14At1g56600AtGolS2 (Arabidopsis thaliana galactinol synthase 2)C.G.S.X.
0.056e+030Zea maysZmAffx.37.1.S1_atAI657467--5e+0At3g21338unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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