Gene omics information

Query gene ID PtpAffx.214003.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.214003.1.S1_atpmrna27278hypothetical protein-5e-10At3g02170LNG2 (LONGIFOLIA2)S.X.H.G.
0.5078.6PtpAffx.224577.1.S1_atpmrna43232hypothetical protein-2e-17At5g03260LAC11 (laccase 11)S.X.H.G.
0.4067.0PtpAffx.1316.2.S1_s_atCA927435hypothetical protein-2e-152At4g13710pectate lyase family proteinS.X.H.G.
0.4067.0PtpAffx.31440.1.A1_a_atCV246320hypothetical protein-1e+0At2g36261unknown proteinS.X.H.G.
0.1626.9PtpAffx.22629.2.S1_atCV230488hypothetical protein-2e-41At4g19120ERD3 (early-responsive to dehydration 3)S.X.H.G.
0.046.9PtpAffx.212535.1.S1_atpmrna24550hypothetical protein-2e-9At5g24580copper-binding family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.199.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
16.699.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
15.199.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.490.4GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.188.6GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.188.6GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-155551Ptp.1220.1.S1_s_atBI072996hypothetical protein-9e-1At5g62440-C.G.S.X.
0.162e-155551Ptp.1220.1.S1_atBI072996hypothetical protein-9e-1At5g62440-C.G.S.X.
0.084e-1791PtpAffx.204162.1.S1_atpmrna8202hypothetical protein-1e+0At2g05400meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.021e-863PtpAffx.223109.1.S1_atpmrna40935hypothetical protein-7e-15At1g74160unknown proteinC.G.S.X.
0.021e-863PtpAffx.223109.1.S1_s_atpmrna40935hypothetical protein-7e-15At1g74160unknown proteinC.G.S.X.
0.022e-656PtpAffx.210463.1.S1_s_atpmrna20541hypothetical protein-7e-12At1g74160unknown proteinC.G.S.X.
0.016e-448PtpAffx.202296.1.S1_atpmrna4593hypothetical protein-2e-2At2g39795mitochondrial glycoprotein family protein / MAM33 family proteinC.G.S.X.
0.011e-140PtpAffx.213597.1.S1_atpmrna26554hypothetical protein-1e-2At5g10910mraW methylase family proteinC.G.S.X.
0.011e-140PtpAffx.213170.1.S1_atpmrna25763hypothetical protein-8e-2At1g35900unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-1067Arabidopsis thalianaAt3g02170821279LNG2 (LONGIFOLIA2)Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function.---C.G.S.X.
0.024e-1171Glycine maxGmaAffx.64396.1.S1_atBU926459--8e-1At4g35590RWP-RK domain-containing proteinC.G.S.X.
0.012e-138Hordeum vulgareContig18302_atContig18302--6e-1At4g02440EID1 (EMPFINDLICHER IM DUNKELROTEN LICHT 1)C.G.S.X.
0.031e-554Oryza sativaOs03g0418700AK101797.1-Conserved hypothetical protein4e-1At5g41960unknown proteinC.G.S.X.
0.017e+034Triticum aestivumTaAffx.55641.1.S1_atCA663252--2e-1At4g11470protein kinase family proteinC.G.S.X.
0.035e-136Vitis vinifera1613019_atCD718307hypothetical protein LOC100266999-5e+0At5g66060iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsC.G.S.X.
0.017e-136Zea maysZm.4304.1.S1_atAI834719--1e-3At3g18600DEAD/DEAH box helicase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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