Gene omics information

Query gene ID PtpAffx.213637.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.213637.1.S1_atpmrna26642hypothetical protein-3e-29At3g08970ATERDJ3AS.X.H.G.
0.4067.0PtpAffx.221307.1.S1_atpmrna38100SAUR family protein-3e-1At5g37910seven in absentia (SINA) family proteinS.X.H.G.
0.4067.0PtpAffx.207548.1.S1_atpmrna14981hypothetical protein-2e-2At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyS.X.H.G.
0.3052.0PtpAffx.77708.1.A1_atCK097133--2e+0At5g22430unknown proteinS.X.H.G.
0.2136.5PtpAffx.222764.1.S1_atpmrna40403hypothetical protein-5e-11At2g48050-S.X.H.G.
0.2136.5PtpAffx.219549.1.S1_atpmrna35497hypothetical protein-3e-7At3g52400SYP122 (SYNTAXIN OF PLANTS 122)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.9100.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
12.999.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
9.298.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
8.698.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.996.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
1.279.6GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
0.974.2GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.872.0GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.315e-59228PtpAffx.42070.1.S1_s_atDN496424hypothetical protein-7e-1At3g52620unknown proteinC.G.S.X.
0.034e-136PtpAffx.61990.1.S1_atDN484016hypothetical protein-2e-42At2g31840-C.G.S.X.
0.034e-136PtpAffx.25056.1.A1_atCV235509--3e-1At3g09110unknown proteinC.G.S.X.
0.024e-136PtpAffx.213590.1.S1_atpmrna26542hypothetical protein-1e-5At3g54050fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeC.G.S.X.
0.014e-136PtpAffx.209071.1.S1_atpmrna17944phytochrome B2 /// hypothetical protein-1e-59At2g18790PHYB (PHYTOCHROME B)C.G.S.X.
0.024e-136PtpAffx.123193.1.S1_s_atCF237103hypothetical protein-2e-111At4g32830AtAUR1 (ATAURORA1)C.G.S.X.
0.024e-136Ptp.4412.2.S1_s_atCV237391hypothetical protein-1e-57At2g25880AtAUR2 (AtAurora2)C.G.S.X.
0.022e+034PtpAffx.52722.1.A1_atCV268968hypothetical protein-9e-50At2g01110APG2 (ALBINO AND PALE GREEN 2)C.G.S.X.
0.022e+034PtpAffx.216644.1.S1_atpmrna31562hypothetical protein-3e-36At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.163e-29129Arabidopsis thalianaAt3g08970820049ATERDJ3AJ domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.---C.G.S.X.
0.032e+034Glycine maxGmaAffx.78414.1.S1_atBM893322--2e-1At5g12240unknown proteinC.G.S.X.
0.072e+032Hordeum vulgareEBro08_SQ007_I17_atEBro08_SQ007_I17--3e+0At2g31410unknown proteinC.G.S.X.
0.034e-550Oryza sativaOs03g0293000AK063376.1-Hypothetical protein9e-1At3g08970ATERDJ3AC.G.S.X.
0.045e+032Triticum aestivumTaAffx.59692.1.S1_atCA596780--3e+1At5g5985040S ribosomal protein S15A (RPS15aF)C.G.S.X.
0.031e+032Vitis vinifera1615184_atCF200643.1--1e-9At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeC.G.S.X.
0.032e+032Zea maysZm.17766.1.S1_atCK371550--3e+0At5g14730unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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