Gene omics information

Query gene ID PtpAffx.212939.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7794.9PtpAffx.212939.1.S1_atpmrna25319hypothetical protein-2e-8At5g07380unknown proteinS.X.H.G.
0.4067.0PtpAffx.202991.1.S1_atpmrna5919hypothetical protein-6e-1At3g04510LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2)S.X.H.G.
0.4067.0PtpAffx.207643.1.S1_atpmrna15162hypothetical protein-3e-1At3g57390AGL18S.X.H.G.
0.2950.5PtpAffx.219686.1.S1_atpmrna35660cytochrome P450-1e+0At3g14650CYP72A11S.X.H.G.
0.2340.5PtpAffx.225864.1.S1_atpmrna45498hypothetical protein-1e+0At4g16500cysteine protease inhibitor family protein / cystatin family proteinS.X.H.G.
0.2136.5PtpAffx.203936.1.S1_atpmrna7766hypothetical protein-7e-1At3g06740zinc finger (GATA type) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.499.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
8.598.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
8.498.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
6.197.6GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
5.396.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.095.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.794.7GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.490.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.088.0GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.088.0GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-1171PtpAffx.210713.1.S1_s_atpmrna21015hypothetical protein-1e+0At5g57720transcriptional factor B3 family proteinC.G.S.X.
0.042e-1171PtpAffx.210713.1.S1_atpmrna21015hypothetical protein-1e+0At5g57720transcriptional factor B3 family proteinC.G.S.X.
0.013e-138PtpAffx.203417.1.S1_atpmrna6802white-brown-complex ABC transporter family-2e-92At5g60740ATPase, coupled to transmembrane movement of substancesC.G.S.X.
0.013e-138PtpAffx.201073.1.S1_atpmrna2119f-box family protein-3e+0At5g37000exostosin family proteinC.G.S.X.
0.023e-138PtpAffx.200579.1.S1_atpmrna1150hypothetical protein-1e+0At3g25717RTFL16 (ROTUNDIFOLIA LIKE 16)C.G.S.X.
0.011e+036PtpAffx.201252.1.S1_atpmrna2483hypothetical protein-0At4g05420DDB1A (DAMAGED DNA BINDING PROTEIN 1A)C.G.S.X.
0.021e+036Ptp.1443.1.S1_atCV270562hypothetical protein-8e-44At1g68050FKF1 (FLAVIN-BINDING, KELCH REPEAT, F BOX 1)C.G.S.X.
0.025e+034PtpAffx.95137.1.A1_atCV258529--8e+0At5g33898unknown proteinC.G.S.X.
0.015e+034PtpAffx.57015.1.A1_atCV242095hypothetical protein-4e+0At2g42750DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-861Arabidopsis thalianaAt5g07380830629unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP---C.G.S.X.
0.023e-138Glycine maxGmaAffx.89985.1.S1_s_atCF805710--4e-3At4g15790unknown proteinC.G.S.X.
0.013e-240Hordeum vulgareContig14730_atContig14730--1e-1At1g11380unknown proteinC.G.S.X.
0.022e+036Oryza sativaOs09g04504009637.m02440--4e+0At5g27780auxin-responsive family proteinC.G.S.X.
0.011e+036Triticum aestivumTaAffx.85116.1.S1_atCA618046--3e-1At3g42780unknown proteinC.G.S.X.
0.023e-136Vitis vinifera1612839_atCF414885hypothetical protein LOC100252266-7e-1At4g32785-C.G.S.X.
0.016e+032Zea maysZmAffx.1389.1.S1_at40794996-64--2e+0At5g41680protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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