Gene omics information

Query gene ID PtpAffx.212195.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.212195.1.S1_atpmrna23908hypothetical protein-1e-33At5g16810ATP binding / protein kinaseS.X.H.G.
0.2136.5PtpAffx.208057.1.S1_atpmrna15992hypothetical protein-5e-2At1g15000scpl50 (serine carboxypeptidase-like 50)S.X.H.G.
0.1729.1PtpAffx.80513.1.S1_atCV277326hypothetical protein-5e-8At3g51550FER (FERONIA)S.X.H.G.
0.1423.5PtpAffx.200366.1.S1_atpmrna730hypothetical protein-1e-14At1g64430-S.X.H.G.
0.1118.1PtpAffx.200337.1.S1_atpmrna671hypothetical protein-1e-4At4g24090unknown proteinS.X.H.G.
0.069.8PtpAffx.62182.1.S1_a_atCV261082hypothetical protein-3e-2At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.997.4GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.896.4GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.596.1GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
3.995.1GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.995.1GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
3.894.9GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.694.5GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
3.494.0GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7801614PtpAffx.124321.1.S1_s_atCX170483hypothetical protein-2e-12At5g16810ATP binding / protein kinaseC.G.S.X.
0.016e-240PtpAffx.214251.1.S1_atpmrna27726hypothetical protein-0At5g25060RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.029e-136PtpAffx.221603.1.S1_atpmrna38571hypothetical protein-4e-44At4g2574040S ribosomal protein S10 (RPS10A)C.G.S.X.
0.039e-136PtpAffx.220843.1.S1_x_atpmrna37291hypothetical protein-1e-2At4g04900RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10)C.G.S.X.
0.019e-136PtpAffx.211831.1.S1_atpmrna23212hypothetical protein-1e-142At3g02060DEAD/DEAH box helicase, putativeC.G.S.X.
0.014e+034PtpAffx.218029.1.S1_atpmrna33537--3e+0At4g18470SNI1C.G.S.X.
0.034e+034PtpAffx.212519.1.S1_atpmrna24517hypothetical protein-6e-5At5g24630BIN4 (brassinosteroid-insensitive4)C.G.S.X.
0.014e+034PtpAffx.211127.1.S1_atpmrna21863--7e-3At5g24890unknown proteinC.G.S.X.
0.024e+034PtpAffx.209868.1.S1_atpmrna19443hypothetical protein-4e-4At4g21140unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.241e-33145Arabidopsis thalianaAt5g16810831544ATP binding / protein kinaseF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;PFO---C.G.S.X.
0.161e-27125Glycine maxGma.13124.1.A1_atCD393402--2e-8At5g16810ATP binding / protein kinaseC.G.S.X.
0.025e+032Hordeum vulgareHZ55F22r_atHZ55F22r--4e+0At4g18740transcription termination factorC.G.S.X.
0.172e-1275Oryza sativaOs02g0694800AK068426.1-Protein kinase domain containing protein3e+0At2g39855unknown proteinC.G.S.X.
0.083e+034Triticum aestivumTaAffx.88677.1.S1_atBG904641--4e+0At5g40220AGL43 (AGAMOUS-LIKE 43)C.G.S.X.
0.435e-85313Vitis vinifera1608998_atCA809208hypothetical protein LOC100264883-5e-35At5g16810ATP binding / protein kinaseC.G.S.X.
0.021e+034Zea maysZm.13985.1.A1_atAY108836.1hypothetical protein LOC100276500-3e-1At3g60260phagocytosis and cell motility protein ELMO1-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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