Gene omics information

Query gene ID PtpAffx.212032.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.212032.1.S1_atpmrna23624hypothetical protein-1e-1At1g29720protein kinase family proteinS.X.H.G.
0.5582.2PtpAffx.205059.1.S1_atpmrna10020hypothetical protein-2e-73At5g60700glycosyltransferase family protein 2S.X.H.G.
0.5279.4PtpAffx.204407.1.S1_atpmrna8658hypothetical protein-3e-2At2g45420LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18)S.X.H.G.
0.4673.7PtpAffx.205723.1.S1_x_atpmrna11295hypothetical protein-2e-5At3g22930calmodulin, putativeS.X.H.G.
0.4268.6PtpAffx.207438.1.S1_atpmrna14771hypothetical protein-3e-1At5g42146unknown proteinS.X.H.G.
0.3863.7PtpAffx.5989.2.S1_s_atCV259773hypothetical protein-6e-8At5g25880ATNADP-ME3 (NADP-malic enzyme 3)S.X.H.G.
0.3255.2Ptp.3892.1.S1_atCV275943hypothetical protein-1e-1At2g44175N-myristoyltransferase-relatedS.X.H.G.
0.2747.1PtpAffx.144812.1.S1_atDN500920hypothetical protein-1e+0At3g04630WDL1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.999.9GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
12.699.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-554PtpAffx.220970.1.S1_x_atpmrna37476hypothetical protein-3e-4At1g29720protein kinase family proteinC.G.S.X.
0.021e-554PtpAffx.216876.1.S1_x_atpmrna31921hypothetical protein-1e-3At4g08850kinaseC.G.S.X.
0.021e-554PtpAffx.201537.1.S1_s_atpmrna3030hypothetical protein-2e-3At1g69790protein kinase, putativeC.G.S.X.
0.024e-552PtpAffx.220510.1.S1_atpmrna36906hypothetical protein-1e+0At1g13650-C.G.S.X.
0.023e-346PtpAffx.221701.1.S1_x_atpmrna38718hypothetical protein-1e-3At4g08850kinaseC.G.S.X.
0.033e-346PtpAffx.220969.1.S1_x_atpmrna37475hypothetical protein-2e-6At1g29720protein kinase family proteinC.G.S.X.
0.013e-346PtpAffx.218232.1.S1_x_atpmrna33782hypothetical protein-6e-3At1g35710leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.011e-244Ptp.5061.1.S1_s_atBU884030hypothetical protein-2e-15At2g33170leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.024e-242PtpAffx.224826.1.S1_atpmrna43698hypothetical protein-2e-3At1g56720protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-140Arabidopsis thalianaAt1g29720839850protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA---C.G.S.X.
0.023e+036Glycine maxGmaAffx.66617.1.S1_atBU760718--5e-33At1g28440HSL1 (HAESA-Like 1)C.G.S.X.
0.012e-138Hordeum vulgareContig10148_atContig10148--2e-22At5g65700BAM1 (BARELY ANY MERISTEM 1)C.G.S.X.
0.012e-140Oryza sativaOsAffx.13851.1.S1_at---0C.G.S.X.
0.011e-450Triticum aestivumTa.14303.1.S1_atBU099515--9e-9At5g63930leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.032e-654Vitis vinifera1620324_atCB002490hypothetical protein LOC100243949-5e-3At1g69790protein kinase, putativeC.G.S.X.
0.018e-136Zea maysZm.19158.2.S1_a_atBM073998hypothetical protein LOC100273021 /// thioredoxin F-type-3e-11At5g16400ATF2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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