Gene omics information

Query gene ID PtpAffx.211622.1.S1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2PtpAffx.211622.1.S1_atpmrna22777--9e-6At1g35580CINV1 (cytosolic invertase 1)S.X.H.G.
0.4673.7PtpAffx.119247.1.A1_atDN486218--4e+0At5g50665unknown proteinS.X.H.G.
0.3153.7PtpAffx.218251.1.S1_atpmrna33803hypothetical protein-2e+1At4g05050UBQ11 (UBIQUITIN 11)S.X.H.G.
0.3153.7PtpAffx.217704.1.S1_atpmrna33068hypothetical protein-3e-86Atcg01280-S.X.H.G.
0.1729.1PtpAffx.208921.1.S1_atpmrna17689hypothetical protein-7e-2At3g06390integral membrane family proteinS.X.H.G.
0.0914.6PtpAffx.219999.1.S1_atpmrna36231hypothetical protein-9e-6At5g18170GDH1 (GLUTAMATE DEHYDROGENASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.799.8GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
21.199.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.996.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.596.1GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.495.9GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.295.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.193.2GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.389.8GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.739e-164577PtpAffx.202277.1.S1_atpmrna4556hypothetical protein-1e-14At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.072e-757Ptp.3733.1.S1_atDN488444--1e-4At4g09510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.073e-654PtpAffx.221308.1.S1_atpmrna38101hypothetical protein-1e-21At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.012e-138PtpAffx.213247.1.S1_s_atpmrna25905hypothetical protein-1e-126At2g41140CRK1 (CDPK-RELATED KINASE 1)C.G.S.X.
0.012e-138PtpAffx.210145.1.S1_atpmrna19989hypothetical protein-2e-51At4g20430subtilase family proteinC.G.S.X.
0.022e-138PtpAffx.142314.1.S1_atCK102710hypothetical protein-2e-14At4g20430subtilase family proteinC.G.S.X.
0.028e-136PtpAffx.92754.1.S1_atCK096310hypothetical protein-6e-10At5g62165AGL42 (AGAMOUS LIKE 42)C.G.S.X.
0.088e-136PtpAffx.55786.1.S1_s_atCA825382hypothetical protein-5e-35At4g09510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.088e-136PtpAffx.212372.1.S1_atpmrna24246hypothetical protein-3e-25At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.099e-652Arabidopsis thalianaAt1g35580840454CINV1 (cytosolic invertase 1)Encodes a protein with cytosolic (alkaline/neutral) invertase activity. The protein was shown to interact with PIP5K9.---C.G.S.X.
0.028e-136Glycine maxGmaAffx.46447.1.S1_atBQ094615--8e-1At1g09415NIMIN-3 (NIM1-INTERACTING 3)C.G.S.X.
0.121e-24113Hordeum vulgareContig11836_atContig11836--6e-10At1g22650beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.101e-965Oryza sativaOs11g0175400AK070884.1-Plant neutral invertase family protein2e-11At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.121e-1481Triticum aestivumTa.21092.1.S1_atCA650885alkaline invertase-1e-9At1g22650beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeC.G.S.X.
0.033e+032Vitis vinifera1610914_atCF203251.1--3e+0At4g04745unknown proteinC.G.S.X.
0.021e+130Zea maysZmAffx.413.1.A1_atAI676845--8e-1At5g13250unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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